Discovering chromatin motifs using FAIRE sequencing and the human diploid genome
- Equal contributors
1 Institute of Molecular Biology, National Chung Hsing University, Taiwan, ROC
2 Institute of Genomics and Bioinformatics, National Chung Hsing University, Taiwan, ROC
3 Department of Biochemistry and the Center of Excellence in Bioinformatics and Life Sciences, State University of New York, Buffalo, NY, USA
4 Institute of Biomedical Sciences, National Chung Hsing University, Taiwan, ROC
5 Agricultural Biotechnology Center, National Chung Hsing University, Taiwan, ROC
6 Department of Genetics, Geisel School of Medicine at Dartmouth, Hanover, NH, USA
7 Institute for Quantitative Biomedical Sciences, Norris Cotton Cancer Center, Geisel School of Medicine at Dartmouth, Lebanon, NH, USA
BMC Genomics 2013, 14:310 doi:10.1186/1471-2164-14-310Published: 8 May 2013
Additional file 1:
Chromatin motif lists with occurrence rates in inaccessible and accessible chromatin groups in genome-wide regions.
Format: XLSX Size: 85KB Download file
Additional file 2:
Chromatin motif lists with TF annotations in genome-wide, intergenic and genic regions. We selected motifs from either accessible or inaccessible occurrence rate among DCSRs > 1%.
Format: XLSX Size: 52KB Download file
Additional file 3:
Top 100 DCSR and NDCSR motifs with TF annotation.
Format: XLSX Size: 22KB Download file