Comparison between infected tissue and isolated haustoria RNAseq libraries. Scatter plot of log2 transformed sequencing counts generated by aligning RNAseq reads to all PST-08/21 genes (A), those that encode predicted secreted peptides (B), or encode non-secreted peptides (C). Red and green colored circles correspond respectively to transcripts that were identified as significantly enriched or depleted in isolated haustoria as determined by DESeq analysis (P ≤ 0.01). Red lines represent the locally weighted polynomial regression (LOWESS method).
Cantu et al. BMC Genomics 2013 14:270 doi:10.1186/1471-2164-14-270