Table 2

Comparison of genes identified by SSH with P. falciparum and P. berghei gametocyte proteome data
Pf P. falciparum GC P. berghei male/female GC Total
PF_ID Gene Ontology MW Troph I & II IV & V V I.II.IV.V FG1 FG 3 FG (1+3) MG1 MG3 MG (1+3) FG +MG FG.MG.PF PB_ID
PF3D7_0210600 signaling 53.7 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_030750
PF3D7_0214600 signaling 204.3 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_031140
PF3D7_0302100 signaling 157.4 2 3 1 7 11 0 0 0 0 0 0 0 11 PBANKA_040110
PF3D7_0303900 signaling 23.2 0 4 4 11 19 0 0 0 0 0 0 0 19 PBANKA_040250
PF3D7_0515300 signaling 255.9 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_111490
PF3D7_0530200 signaling 59.8 0 0 0 3 3 0 0 0 0 0 0 0 3 PBANKA_124460
PF3D7_0624000 signaling 55.3 17 20 2 24 46 6 13 19 11 10 21 40 86 PBANKA_112290
PF3D7_0818200 signaling 30.2 18 21 14 25 60 11 20 31 9 11 20 51 111 PBANKA_071260
PF3D7_0927200 signaling 189.7 0 13 2 5 20 0 0 0 0 0 0 0 20 PBANKA_082800
PF3D7_1004300 signaling 131.7 3 5 1 0 6 0 0 0 0 0 0 0 6 PBANKA_120260
PF3D7_1113100 signaling 25.1 1 2 1 3 6 0 0 0 0 0 0 0 6 PBANKA_093450
PF3D7_1230900 signaling 111.5 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_144560
PF3D7_1233600 signaling 146.3 0 4 0 8 12 0 0 0 0 0 0 0 12 PBANKA_144820
PF3D7_1238100 signaling 266.4 7 9 3 9 21 2 6 8 8 7 15 23 44 PBANKA_145260
PF3D7_1238900 signaling 58.9 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_145340
PF3D7_1356800 signaling 475.7 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_113310
PF3D7_1358600 signaling 118.3 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_113490
PF3D7_1403900 signaling 35.2 6 9 5 12 26 × × × × × × × 26 ×
PF3D7_1433400 signaling 682.5 0 0 2 0 2 0 0 0 0 0 0 0 2 PBANKA_101150
PF3D7_1442200 signaling 118.7 0 0 1 0 1 0 0 0 0 0 0 0 1 PBANKA_130610
PF3D7_1463900 signaling 127.1 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_132710
PF3D7_1464600 signaling 170.5 23 31 0 3 34 0 0 0 0 0 0 0 34 PBANKA_132800
PF3D7_0420300 cell cycle & gene expr. 400.2 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_052170
PF3D7_0513600 cell cycle & gene expr. 129.2 10 29 0 10 39 0 0 0 0 0 0 0 39 PBANKA_111330
PF3D7_0615400 cell cycle & gene expr. 323.2 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_123010
PF3D7_0622900 cell cycle & gene expr. 237.4 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_112180
PF3D7_0811300 cell cycle & gene expr. 200.2 0 2 1 2 5 0 0 0 0 0 0 0 5 PBANKA_142620
PF3D7_0827800 cell cycle & gene expr. 283.6 0 0 1 0 1 0 0 0 0 0 0 0 1 PBANKA_070290
PF3D7_1011800 cell cycle & gene expr. 131.6 41 22 6 17 45 4 11 15 14 0 14 29 74 PBANKA_121020
PF3D7_1018500 cell cycle & gene expr. 12.5 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_050270
PF3D7_1019000 cell cycle & gene expr. 280.8 7 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_050320
PF3D7_1034900 cell cycle & gene expr. 101.2 21 31 0 49 80 6 0 6 3 0 3 9 89 PBANKA_051870
PF3D7_1103800 cell cycle & gene expr. 392.0 7 12 0 23 35 0 0 0 0 0 0 0 35 PBANKA_094310
PF3D7_1105500 cell cycle & gene expr. 20.1 1 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_094140
PF3D7_1115200 cell cycle & gene expr. 94.3 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_093250
PF3D7_1347500 cell cycle & gene expr. 42.2 18 15 30 22 67 11 0 11 7 10 17 28 95 PBANKA_136030
PF3D7_1360900 cell cycle & gene expr. 44.8 8 11 11 12 34 × × × × × × × 34 ×
PF3D7_1417200 cell cycle & gene expr. 519.8 5 6 0 6 12 0 0 0 0 0 0 0 12 PBANKA_102550
PF3D7_1445900 cell cycle & gene expr. 60.0 16 25 3 21 49 0 0 0 1 0 1 1 50 PBANKA_130970
PF3D7_1469700 cell cycle & gene expr. 24.6 0 2 0 3 5 0 0 0 0 0 0 0 5 PBANKA_133290
PF3D7_0422300 IMC, cytoskeleton 49.7 11 25 13 30 68 0 0 0 0 0 0 0 68 PBANKA_052270
PF3D7_0503400 IMC, cytoskeleton 13.7 6 5 1 8 14 0 0 0 0 1 1 1 15 PBANKA_110310
PF3D7_0515700 IMC, cytoskeleton 51.8 3 0 0 7 7 1 0 1 0 0 0 1 8 PBANKA_111530
PF3D7_0708000 IMC, cytoskeleton 103.6 0 0 2 12 14 0 0 0 1 0 1 1 15 PBANKA_080520
PF3D7_0724900 IMC, cytoskeleton 222.6 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_062240
PF3D7_0918000 IMC, cytoskeleton 44.6 14 12 1 23 36 0 0 0 0 0 0 0 36 PBANKA_081900
PF3D7_1020200 IMC, cytoskeleton 99.1 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_050430
PF3D7_1246200 IMC, cytoskeleton 41.2 23 28 13 29 70 12 19 31 6 6 12 43 113 PBANKA_145930
PF3D7_1246400 IMC, cytoskeleton 23.5 1 0 0 3 3 0 0 0 0 0 0 0 3 PBANKA_145950
PF3D7_1251200 IMC, cytoskeleton 69.0 1 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_146410
PF3D7_1351700 IMC, cytoskeleton 151.2 0 0 1 0 1 0 0 0 0 0 0 0 1 PBANKA_136440
PF3D7_0102200 proteostasis 126.5 33 3 1 0 4 × × × × × × × 4 ×
PF3D7_0215400 proteostasis 110.8 0 0 1 0 1 0 0 0 0 0 0 0 1 PBANKA_031210
PF3D7_0306200 proteostasis 41.6 4 7 0 8 15 0 0 0 0 0 0 0 15 PBANKA_040460
PF3D7_0708400 proteostasis 86.2 54 60 17 82 159 7 0 7 8 10 18 25 184 PBANKA_080570
PF3D7_0807500 proteostasis 29.5 11 11 2 20 33 3 8 11 4 2 6 17 50 PBANKA_122310
PF3D7_0815800 proteostasis 214.7 0 3 0 0 3 0 0 0 0 0 0 0 3 PBANKA_071500
PF3D7_0818900 proteostasis 73.9 45 46 33 57 136 34 40 74 31 28 59 133 269 PBANKA_071190
PF3D7_0917900 proteostasis 72.4 45 40 42 51 133 24 46 70 16 16 32 102 235 PBANKA_081890
PF3D7_1136400 proteostasis 107.1 0 3 0 11 14 1 0 1 0 0 0 1 15 PBANKA_091220
PF3D7_1466300 proteostasis 132.8 23 26 3 34 63 4 9 13 4 0 4 17 80 PBANKA_132970
mal_mito_2 metabolism general 53.0 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_MIT0002
PF3D7_0104400 metabolism general 62.5 0 1 1 3 5 0 0 0 0 0 0 0 5 PBANKA_020870
PF3D7_0403200 metabolism general 69.4 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_100080
PF3D7_0511800 metabolism general 69.1 36 29 2 40 71 2 0 2 0 0 0 2 73 PBANKA_111140
PF3D7_0801900 metabolism general 552.0 0 0 1 0 1 0 0 0 0 0 0 0 1 PBANKA_122830
PF3D7_0806800 metabolism general 123.0 11 9 4 29 42 0 0 0 0 3 3 3 45 PBANKA_122380
PF3D7_0922200 metabolism general 44.8 25 16 0 4 20 1 2 3 0 0 0 3 23 PBANKA_082310
PF3D7_1444800 metabolism general 40.1 21 23 11 35 69 17 23 40 22 22 44 84 153 PBANKA_130860
PF3D7_0102500 cell surface & PVM 181.2 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_133270
PF3D7_0202500 cell surface & PVM 11.5 1 0 0 0 0 × × × × × × × 0 ×
PF3D7_0406200 cell surface & PVM 16.7 3 9 34 17 60 × × × × × × × 60 ×
PF3D7_0423700 cell surface & PVM 10.2 0 5 0 2 7 × × × × × × × 7 ×
PF3D7_0707300 cell surface & PVM 103.6 3 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_080450
PF3D7_0731500 cell surface & PVM 174.6 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_133270
PF3D7_0930300 cell surface & PVM 195.7 77 0 3 0 3 0 0 0 0 0 0 0 3 PBANKA_083100
PF3D7_1021900 cell surface & PVM 267.4 11 26 4 31 61 0 0 0 0 0 0 0 61 PBANKA_112590/ PBANKA_141230
PF3D7_1028700 cell surface & PVM 58.1 0 0 1 11 12 0 0 0 0 0 0 0 12 PBANKA_051280
PF3D7_1033200 cell surface & PVM 38.9 11 16 0 4 20 × × × × × × × 20 ×
PF3D7_1035300 cell surface & PVM 141.1 0 0 1 0 1 × × × × × × × 1 ×
PF3D7_1035700 cell surface & PVM 80.3 10 0 0 0 0 × × × × × × × 0 ×
PF3D7_1103500 cell surface & PVM 67.3 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_094340
PF3D7_1218800 cell surface & PVM 39.6 0 0 2 5 7 0 0 0 0 0 0 0 7 PBANKA_143440
PF3D7_1228600 cell surface & PVM 86.6 23 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_144330
PF3D7_1335300 cell surface & PVM 382.9 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_000220 + 10 more
PF3D7_0206200 others 62.7 0 0 0 2 2 0 0 0 0 0 0 0 2 PBANKA_030390
PF3D7_0207700 others 108.7 11 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_030480
PF3D7_0311600 others 84.0 0 0 0 5 5 0 0 0 0 0 0 0 5 PBANKA_040960
PF3D7_0320700 others 21.0 0 0 0 8 8 0 0 0 0 0 0 0 8 PBANKA_121780
PF3D7_0403800 others 83.4 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_100150
PF3D7_0709900 others 274.0 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_122050
PF3D7_0817600 others 112.2 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_071320
PF3D7_0930000 others 66.8 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_083070
PF3D7_1027800 others 44.2 17 9 14 18 41 0 0 0 0 0 0 0 41 PBANKA_051190
PF3D7_1033800 others 52.3 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_051760
PF3D7_1103100 others 13.0 2 2 5 4 11 1 0 1 0 0 0 1 12 PBANKA_094360
PF3D7_1207700 others 43.4 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_060620
PF3D7_1358800 others 17.3 8 6 4 9 19 8 5 13 1 0 1 14 33 PBANKA_113510
PF3D7_1408600 others 25.1 8 8 7 12 27 2 5 7 2 0 2 9 36 PBANKA_103390
PF3D7_1457000 others 47.6 0 0 0 0 0 2 0 2 0 1 1 3 3 PBANKA_132070
PF3D7_0202400 unknown 141.9 27 0 0 0 0 × × × × × × × 0 ×
PF3D7_0411000 unknown 179.7 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_061240
PF3D7_0417400 unknown 822.4 0 0 1 0 1 0 0 0 0 0 0 0 1 PBANKA_071950
PF3D7_0508900 unknown 370.2 0 2 0 0 2 0 0 0 0 0 0 0 2 PBANKA_110850
PF3D7_0601900 unknown 14.7 0 0 0 1 1 × × × × × × × 1 ×
PF3D7_0704100 unknown 425.3 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_080180
PF3D7_0730800.1 unknown 32.1 5 0 0 0 0 × × × × × × × 0 ×
PF3D7_0904200 unknown 34.0 0 1 0 0 1 0 0 0 0 0 0 0 1 PBANKA_041720
PF3D7_1021700 unknown 830.2 0 0 0 1 1 1 0 1 0 0 0 1 2 PBANKA_050590
PF3D7_1023000 unknown 48.9 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_050720
PF3D7_1024800 unknown 171.1 4 33 15 33 81 0 0 0 0 0 0 0 81 PBANKA_050900
PF3D7_1026100 unknown 23.9 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_051030
PF3D7_1026600 unknown 196.5 0 0 0 0 0 × × × × × × × 0 ×
PF3D7_1114600 unknown 39.6 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_093310
PF3D7_1124200 unknown 49.3 0 0 0 7 7 0 0 0 1 0 1 1 8 PBANKA_092410
PF3D7_1126700 unknown 110.1 0 1 0 0 1 0 0 0 0 0 0 0 1 PBANKA_092170
PF3D7_1225600 unknown 93.1 0 1 0 0 1 0 0 0 0 0 0 0 1 PBANKA_144050
PF3D7_1230100 unknown 61.5 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_144480
PF3D7_1239400 unknown 22.0 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_145390
PF3D7_1316700 unknown 73.4 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_141520
PF3D7_1321000 unknown 80.6 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_141930
PF3D7_1362600 unknown 32.1 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_113860
PF3D7_1438800 unknown 84.0 0 0 0 2 2 0 0 0 0 0 0 0 2 PBANKA_130270
PF3D7_1439600 unknown 22.6 0 6 0 10 16 1 0 1 0 0 0 1 17 PBANKA_130350
PF3D7_1451200 unknown 176.2 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_131490
PF3D7_1452400 unknown 107.5 0 0 0 0 0 0 0 0 0 0 0 0 0 PBANKA_131610

PF troph, peptide hits for gametocyte-less P. falciparum trophozoites [12,13]; I & II, stage I & II P. berghei gametocyte [12,13]; V, stage V P. falciparum gametocytes [9]; I.II.IV.V, sum of all P. falciparum gametocyte data; FG1, peptide hits from highly purified female P. berghei gametocyte sample 1 [22]; FG3, peptide hits from highly purified female P. berghei gametocytes sample 3 [22]; FG(1+3), sum of both; MG1, peptide hits from highly purified male P. berghei gametocyte sample 1 [22]; MG3, peptide hits from highly purified male P. berghei gametocyte sample 3 [22]; MG(1+3), sum of both; FG+MG, total number peptide hits from all four P. berghei gametocyte samples; total FG.MG.PF, total number of P. falciparum & P. berghei gametocyte peptide hits.

Ngwa et al.

Ngwa et al. BMC Genomics 2013 14:256   doi:10.1186/1471-2164-14-256

Open Data