|Genome assembly statistics|
|S. melliferum IPMB4A||S. melliferum KC3||S. citri GII3-3X|
|Number of chromosomal contigs||24||4||39|
|Combined size of chromosomal contigs (bp)||1,098,846||1,260,174||1,525,756|
|Estimated chromosomal size (bp)||1,380,000||1,430,000||1,820,000|
|Estimated coverage (%)||79.6||88.1||83.8|
|G+C content (%)||27.5||27.0||25.9|
|Coding density (%)||85.1||83.0||80.2|
|Length distribution (Q1/Q2/Q3) (a.a.)||176/280/440||119/233/376||83/149/286|
|Number of plasmids||0||4||7|
1For S. melliferum IPMB4A, putative pseudogenes were annotated with the’/pseudo’ tag in gene feature as suggested by the NCBI GenBank guidelines and were not counted in the total number of protein-coding genes. For S. melliferum KC3 and S. citri GII3-3X, putative pseudogenes were annotated by adding the term ‘truncated’ in the CDS product description field and were included in the total number of protein-coding genes.
Lo et al.
Lo et al. BMC Genomics 2013 14:22 doi:10.1186/1471-2164-14-22