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Open Access Highly Accessed Research article

RNAseq versus genome-predicted transcriptomes: a large population of novel transcripts identified in an Illumina-454 Hydra transcriptome

Yvan Wenger and Brigitte Galliot*

Author Affiliations

Department of Genetics and Evolution, Institute of Genetics and Genomics in Geneva (iGE3), University of Geneva, Geneva, Switzerland

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BMC Genomics 2013, 14:204  doi:10.1186/1471-2164-14-204

Published: 25 March 2013

Additional files

Additional file 1:

Contains 5 figures and 1 table.

Format: PDF Size: 2.4MB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional file 2:

Tables containing gene families characterized by BlastX+, PANTHER and PFAM in the various Hydra transcriptomes (Excel file).

Format: XLSX Size: 6.5MB Download file

Open Data

Additional file 3:

Tables containing the primers and the criteria used to test the expression of a subset of Hydra-bo RNA-seq only and predicted-only genes with a summary of the results (Excel file).

Format: XLSX Size: 80KB Download file

Open Data

Additional file 4:

Table containing the sequences and annotations of the 170 novel evolutionarily-conserved genes identified in Hydr-bo but not predicted in the genome (Excel file).

Format: XLSX Size: 543KB Download file

Open Data