Table 6

Significant differentially expressed transcripts located in each of the QTL regions
Trait Chr. Interval Gene definition RAP locus
RL 3 RM282-RM6283 SUS Os03t0340500, Os03t0401300
RDW 3 RM168-RM143 EGase Os03t0736300
RL 4 RM5953-RM3317 SUS Os04t0249500
RD 5 RM3800-RM3870 PP2C Os05t0457200
RDW 5 RM3870-RM6972 PDC Os05t0469600, Os05t0469800
RDW 5 RM6972-RM274 PFK Os05t0524400
RV 6 RM6734-RM1163 RR-B Os06t0183100
RL 7 RM234-RM118 SnRK2 Os07t0622000
RL, TRL, RSA, RV, RTN, RDW 7 RM180-RM5436 CesA

Os07t0208500, Os07t0208533,

Os07t0252400

RFW 10 RM6100-RM3773 PDC Os10t0480900
GYD, NP, NSP, HD 7 RM180-RM5436 CesA

Os07t0208500, Os07t0208533,

Os07t0252400

HD 3 RM148-RM85 CesA Os03t0837100
GYD 5 RM6972-RM274 PFK Os05t0524400

Zhai et al.

Zhai et al. BMC Genomics 2013 14:19   doi:10.1186/1471-2164-14-19

Open Data