Table 6

Selection of some of the novel relevant reproductive-related genes identified in the Turbot 3 database
Gene name Gene abbreviation Contig length Gene Ontology E-value Species Annotation resource
Androgen receptor alpha ARA 1,780 GO:0005634 GO:0003707 GO:0003700 GO:0006355 1,00E-110 Gasterosteus aculeatus Uniref90
Cytochrome P450 aromatase CYP19A 2,109 GO:0009055 GO:0020037 GO:0005506 GO:0004497 0 Paralichthys olivaceus Uniref90
Follicle stimulating hormone receptor FSHR 2,890 GO:0016021 GO:0007186 0 Dicentrarchus labrax Uniref90
Gonadal soma derived factor GSF 2,035 GO:0008083 3,00E-60 Oryzias latipes Uniref90
Gonadotropin alpha GTC 1,529 GO:0005576 GO:0005179 2,00E-47 Amphiprion melanopus Uniref90
Growth differentiation factor 9 GDF9 2,407 GO:0008083 1,00E-131 Dicentrarchus labrax Uniref90
Meiotic nuclear division protein 1 homolog MND1 1,386 4,00E-96 Anoplopoma fimbria Uniref90
Mitotic arrest deficient 2 MAD2 396 GO:0007067 2,00E-26 Oryzias latipes Uniref90
Müllerian inihibiting substance AMH 1,388 GO:0008083 GO:0008406 2,00E-47 Paralichthys olivaceus Uniref90
Pituitary tumor-transforming PTTG1IP 1,257 GO:0008083 4,00E-51 Salmo salar Uniref90
Sex hormone binding globulin SHBG 906 1,00E-70 Verasper moseri Uniref90
SRY-box containing gene 6 SOX6 804 GO:0005634 GO:0003677 1,00E-83 Takifugu rubripes nr
SRY-box containing gene 9 SOX9 610 GO:0005634 GO:0003677 2,00E-59 Takifugu rubripes nr
Spermatogenesis associated 13 SPATA13 1,369 GO:0005089 GO:0005622 GO:0035023 1,00E-146 Takifugu rubripes nr
StAR-related lipid transfer protein 5 START-5 737 GO:0006694 GO:0015485 GO:0017127 2,00E-81 Salmo salar Uniref90
StAR-related lipid transfer protein 7 START-7 603 4,00E-48 Salmo salar nr
Steroid 11-beta-hydroxylase CYP11B 584 GO:0009055 GO:0020037 GO:0005506 GO:0004497 6,00E-53 Dicentrarchus labrax Uniref90
Vasa VASA 2,027 GO:0005524 GO:0008026 1,00E-128 Auxis thazard Uniref90
Zona pellucida glycoproteins ZPC 468 2,00E-14 Sparus aurata Uniref90
Zygote arrest protein 1 ZAR1 353 GO:0005737 GO:0007275 4,00E-22 Takifugu rubripes Uniref90

Ribas et al.

Ribas et al. BMC Genomics 2013 14:180   doi:10.1186/1471-2164-14-180

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