Table 1

RXE based on mapping parameters
Mapping parameter
Tissue Unique Non-unique Non-unique splicing
Xm, Human lymphoblast −0.86 −0.34 0.21
Xp, Human lymphoblast −0.92 −0.54 −0.04
Human lymphoblast −0.75 −0.42 −0.20
Human brain −0.32 −0.15 −0.00
Human liver −1.43 −1.06 −0.79
Mouse brain −0.68 −0.53 −0.20
Xm, mouse brain −0.99 0.88 −0.70
Xp, mouse brain −0.76 −0.88 −0.96
XX, Mouse Brain −0.87 −0.82 −0.86
XY, mouse brain −0.45 −0.44 −0.60

Relative X-chromosome expression values based on mapping parameters. Numbers based on calculations from raw number of reads mapped. No annotation was used to delineate between genetic categorical groups (i.e. exon, introns, etc.). All ratios were log2-transformed to maintain consistency with other expression values.

Jue et al.

Jue et al. BMC Genomics 2013 14:150   doi:10.1186/1471-2164-14-150

Open Data