Additional file 9.
Nucleotides surrounding the UTR-LTR junction of CRM1TR and CRM4TR repeats in full length consensus CRM1 and CRM4 sequences. Short direct repeats required to create the UTR-LTR junction characteristic of CRM1TR and CRM4TR monomer junctions via illegitimate recombination in a single step are absent near the splice sites in CRM1B and CRM4B consensus sequences, thus the initial recombinants were likely generated in multiple steps, as illustrated in Figure 3a.
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Sharma et al. BMC Genomics 2013 14:142 doi:10.1186/1471-2164-14-142