Massive screening of copy number population-scale variation in Bos taurus genome
1 Department for innovation in biological, agro-food and forest systems, University of Tuscia, via de Lellis, Viterbo, 01100, Italy
2 CASPUR, Inter-University Consortium for Supercomputing in Research, via dei Tizii 6b, Roma, 00185, Italy
3 Department of Physics, Sapienza University of Rome, P.le A. Moro 5, Rome, 00185, Italy
4 Zootechnical institute, University Cattolica Sacro Cuore, Piacenza, 29100, Italy
5 IIT@Sapienza, Center for life nano science, Rome, 00185, Italy
6 Consiglio per la ricerca e la sperimentazione in agricoltura - CRA-PCM, Animal Production Research Centre, via Salaria 31, Monterotondo, 00015, Italy
BMC Genomics 2013, 14:124 doi:10.1186/1471-2164-14-124Published: 26 February 2013
Additional file 1:
CNVs dataset. Complete list of CNV found in this study.
Format: TSV Size: 212KB Download file
Additional file 2:
CNVRs dataset. Complete list of CNVR found in this study. It also includes the list of the types of CNV in each region.
Format: TSV Size: 16KB Download file
Additional file 3:
CNV distribution. List of CNVs and their copy number, length, frequency in the population and number of genes included.
Format: TSV Size: 165KB Download file
Additional file 4:
CNV gene content. List of genes in each copy number variant.
Format: TSV Size: 4.1MB Download file
Additional file 5:
Gene list. Complete list of the involved genes.
Format: TSV Size: 308KB Download file
Additional file 6:
Breed specific genes. Complete list of genes specific for each of the five studied Bos taurus breeds.
Format: TSV Size: 21KB Download file
Additional file 7:
Gene frequency. Complete list of genes and their frequency for each Bos taurus breed.
Format: TSV Size: 48KB Download file