Open Access Highly Accessed Research article

Novel core promoter elements in the oomycete pathogen Phytophthora infestans and their influence on expression detected by genome-wide analysis

Sourav Roy1, Laetitia Poidevin1, Tao Jiang2 and Howard S Judelson1*

Author Affiliations

1 Department of Plant Pathology and Microbiology, University of California, 92521, Riverside, CA, USA

2 Department of Computer Science, University of California, 92521, Riverside, CA, USA

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BMC Genomics 2013, 14:106  doi:10.1186/1471-2164-14-106

Published: 16 February 2013

Additional files

Additional file 1:

PSPMs for the P. infestans motifs.

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Additional file 2:

Comparison of oomycete and non-oomycete TATA-binding proteins, sequence logos of INR+FPR motif from different oomycetes, and correlation analysis of microarray and qRT-PCR data.

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Open Data

Additional file 3:

List of genes containing motifs associated with over-represented GO terms.

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Open Data