Figure 2.

Proportion of significant genes in each module of gene sets. Significant genes were defined as those with gene-wise P values <0.05. The proportion of significant genes in module genes and in the background genes in the network were shown for each scenario of using VEGAS-all, VEGAS-top, and minP as input genes, respectively.

Jia and Zhao BMC Genomics 2012 13(Suppl 6):S15   doi:10.1186/1471-2164-13-S6-S15