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This article is part of the supplement: SNP-SIG 2011: Identification and annotation of SNPs in the context of structure, function and disease

Open Access Proceedings

Automated extraction and semantic analysis of mutation impacts from the biomedical literature

Nona Naderi and René Witte*

Author Affiliations

Semantic Software Lab, Department of Computer Science and Software Engineering, Concordia University, Montréal, Québec, H2K 3V4, Canada

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BMC Genomics 2012, 13(Suppl 4):S10  doi:10.1186/1471-2164-13-S4-S10

Published: 18 June 2012

Additional files

Additional file 1:

List of documents used for evaluation The list of documents (PubMed IDs) used in the corpora for mutation series and impact analysis evaluation.

Format: PDF Size: 47KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional file 2:

Manual annotations Manual annotations of 40 documents used for evaluation, presented in tab-delimited format.

Format: TXT Size: 324KB Download file

Open Data

Additional file 3:

OMM system results The output of our OMM system, listing all detected impacts that are grounded to their respective mutations.

Format: TXT Size: 567KB Download file

Open Data