Table 1

Sensitivity based on the number of correctly predicted base pairs

ncRNA

Num. of sequences

Avg len.

Min len.

Max len.

Sensitivity (RNAcoast)

Sensitivity (RNAfold)


Hh3

84

55

40

82

85.04%

95.71%

tRNA

95

74

66

93

81.67%

64.59%

Intron-gII

98

87

42

154

81.94%

83.71%

P4P6

30

126

58

191

57.42%

64.62%

HCV

79

112

85

116

83.01%

78.43%


Performance comparison between RNAcoast and RNAfold measured by the number of correctly predicted base pairs.

Shareghi et al. BMC Genomics 2012 13(Suppl 3):S7   doi:10.1186/1471-2164-13-S3-S7

Open Data