Additional file 2.

Smooth scatterplot of p-values of the 3-way contingency table test in liver and motif similarity measure. Logarithm of the p-values of the 3-way contingency table test for TF pairs in liver (vertical axis) vs. motif similarity measure Smax (horizontal axis). Red points and orange triangles denote experimentally shown PPIs and trios with a known interacting co-factor, respectively.

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Myšičková and Vingron BMC Genomics 2012 13(Suppl 1):S2   doi:10.1186/1471-2164-13-S1-S2