Table 4

H2h pairs where both genes were bound/regulated by STP2

Pair

Systematic name

Gene name

Evidence1

Gene ontology (GO) annotations


1

YDL234C

GYP7

Regulation

BP GO:0032889 - regulation of vacuole fusion, non-autophagic; CC GO:0005737 - cytoplasm; MF GO:0005097 - Rab GTPase activator activity

YDL233W

n/a

Regulation

CC GO:0005634 - nucleus

2

YFL060C

SNO3

Regulation

BP GO:0008614 - pyridoxine metabolic process; MF GO:0016740 - transferase activity

YFL059W

SNZ3

Regulation

BP GO:0042823 - pyridoxal phosphate biosynthetic process; MF GO:0005515 - protein binding

3

YHR136C

SPL2

Regulation

BP GO:0009266 - response to temperature stimulus; CC GO:0005737 - cytoplasm; MF GO:0004860 - protein kinase inhibitor activity

YHR137W

ARO9

Regulation

BP GO:0009058 - biosynthetic process; CC GO:0005634 - nucleus; MF GO:0016769 - transferase activity, transferring nitrogenous groups

4

YIR027C

DAL1

Regulation

BP GO:0009442 - allantoin assimilation pathway; MF GO:0004038 - allantoinase activity

YIR028W

DAL4

Regulation

BP GO:0015720 - allantoin transport; CC GO:0016021 - integral to membrane; MF GO:0005274 - allantoin uptake transmembrane transporter activity

5

YMR095C

SNO1

Regulation

BP GO:0008615 - pyridoxine biosynthetic process; CC GO:0005737 - cytoplasm; MF GO:0016740 - transferase activity

YMR096W

SNZ1

Regulation

BP GO:0042823 - pyridoxal phosphate biosynthetic process; MF GO:0005515 - protein binding

6

YNL334C

SNO2

Regulation

BP GO:0008615 - pyridoxine biosynthetic process; MF GO:0016740 - transferase activity

YNL333W

SNZ2

Regulation

BP GO:0042823 - pyridoxal phosphate biosynthetic process; MF GO:0005515 - protein binding

7

YOL155C

HPF1

Regulation

BP GO:0031505 - fungal-type cell wall organization; CC GO:0009277 - fungal-type cell wallMF GO:0015926 - glucosidase activity

YOL154W

ZPS1

Regulation

CC GO:0009277 - fungal-type cell wall


Pairs with known interactions are highlighted with bold font. 1 Evidence type (binding or regulation) of STP2 and the gene.

Chang et al. BMC Genomics 2012 13(Suppl 1):S11   doi:10.1186/1471-2164-13-S1-S11

Open Data