Additional file 8.

Comparison of minimum depth of coverage SNP filters. Total number of (A) SNPs and (B) non-synonymous SNP remaining after increasing the minimum sequence read depth of coverage. Proportion of homozygous and heterozygous (C) SNPs and (D) non-synonymous SNPs lost by increasing minimum sequence read depth of coverage.

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Doan et al. BMC Genomics 2012 13:78   doi:10.1186/1471-2164-13-78