Table 1

Identification of CNVs in 18 diverse pig populations
Breed Number of animals identified CNV Number of CNVs Status of CNVs Average Size(kb)
Total Unique Gain Loss Gain/Loss
White Duroc × Erhualian F2 intercross 752 683 456 370 305 8 227.21
Bamaxiang × Erhualian F2 intercross 77 92 30 41 51 - 184.42
Rongchang × Erhualian F2 intercross 87 159 48 65 94 - 218.72
Shazilin × Erhualian F2 intercross 156 254 149 153 101 - 240.92
Tongcheng × Erhualian F2 intercross 51 104 22 53 51 - 218.52
Bamaxiang 15 66 35 7 59 - 206.91
Dongshan 9 35 12 12 23 - 215.13
Duroc 10 124 52 13 111 - 220.26
Erhualian 16 48 6 16 32 - 232.96
Jinghua 14 75 40 19 56 - 191.21
Minzhu 15 46 6 22 23 1 230.86
Rongchang 63 180 64 90 90 - 194.64
Shanggao Two-End-Black 10 31 6 7 24 - 170.79
Shazilin 8 34 5 12 22 - 144.51
Sutai 10 57 13 22 35 - 206.23
Tongcheng 15 50 12 23 27 - 153.23
White Duroc 3 23 0 6 17 - 183.52
wild boar 16 61 15 33 28 - 141.83
Total 1,327 2,122 971 964 1,149 9 -
Average - 117.89 53.94 53.56 63.83 0.50 223.51

Chen et al.

Chen et al. BMC Genomics 2012 13:733   doi:10.1186/1471-2164-13-733

Open Data