Open Access Highly Accessed Research article

A comprehensive survey of copy number variation in 18 diverse pig populations and identification of candidate copy number variable genes associated with complex traits

Congying Chen1, Ruimin Qiao1, Rongxing Wei12, Yuanmei Guo1, Huashui Ai1, Junwu Ma1, Jun Ren1 and Lusheng Huang1*

Author Affiliations

1 Key Laboratory for Animal Biotechnology of Jiangxi Province and the Ministry of Agriculture of China, Jiangxi Agricultural University, Nanchang, 330045, China

2 Nanchang Working Canine Base, Nanchang, 330045, China

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BMC Genomics 2012, 13:733  doi:10.1186/1471-2164-13-733

Published: 27 December 2012

Additional files

Additional file 1:

Table S1. CNVRs identified in this study and its state.

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Additional file 2:

Table S3. Primers and probes used for qPCR assays.

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Additional file 3:

Figure S1. The schematic diagrams depicting the validation of 7 CNVRs by quantitative real time PCR.

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Additional file 4:

Table S2. The distribution of CNVs and CNVRs in each of 18 diverse populations.

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Additional file 5:

Table S4. 1,055 well annotated genes located within the identified CNV regions. The 634 genes marked by * are also the copy number variable genes in human.

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