Table 3 |
|||
| TpA/ApT and (CpA + TpG)/(ApC + GpT) ratios for transposons in the genome of M. fijiensis | |||
| Transposon (Group) | Number of sequences | TpA/ApT value* | (CpA + TpG)/(ApC + GpT) value* |
| Mutator | 3 | 2.03 | 0.36 |
| Mariner1 | 4 | 1.93 | 0.32 |
| Mariner2 | 3 | 2.09 | 0.55 |
| LTR-Copia | 3 | 1.92 | 0.34 |
| LTR-Gypsy1 | 7 | 2.07 | 0.27 |
| LTR-Gypsy2 | 6 | 2.10 | 0.25 |
| LTR-Gypsy3 | 11 | 2.06 | 0.23 |
| LTR-Gypsy4 | 41 | 1.93 | 0.43 |
*Standard reference values of the RIP indices are: TpA/ApT > 0.89 and (CpA + TpG)/(ApC + GpT) < 1.03 [51].
Santana et al. BMC Genomics 2012 13:720 doi:10.1186/1471-2164-13-720
