Table 5

Anti-inflammatory genes and nuclear receptors up-regulated in DA.F344(Cia5a) congenics
Gene Symbol Gene Name Entrez Gene ID Fold difference DA/Cia5a p-value*
Anti-inflammatory and regulators of immune responses
Scd1 stearoyl-Coenzyme A desaturase 1 246074 54.62 0.0001
Timp3 TIMP metallopeptidase inhibitor 3 25358 11.48 0.000000003
Adipoq adiponectin, C1Q and collagen domain containing 246253 10.96 0.000003
Ptpn11 protein tyrosine phosphatase, non-receptor type 11 25622 4.18 0.00002
Cyp2j3 cytochrome P450, family 2, subfamily j, polypeptide 3 313375 3.38 0.002
Ptgis prostaglandin I2 (prostacyclin) synthase 25527 2.63 0.0003
Cat catalase 24248 1.91 0.002
Gss glutathione synthetase 25458 1.56 0.001
Sod1 superoxide dismutase 1, soluble 24786 1.53 0.00002
Nuclear receptors and an interacting protein
Rxrg retinoid X receptor gamma, Nr2b3 83574 5.39 0.0001
Pparg peroxisome proliferator-activated receptor gamma, Nr1c3 25664 5.32 0.00005
Rev-erba Nr1d1 252917 3.41 0.004
Arp1 Nr2f2 113984 2.45 0.0002
Nrip1 nuclear receptor interacting protein 1 304157 2.35 0.00004
Thrb thyroid hormone receptor beta, Nr1a2 24831 2.07 0.002
Thra thyroid hormone receptor alpha, Nr1a1 81812 1.97 0.001
Ncor1 nuclear receptor co-repressor 1 54299 1.89 0.003
Rora RAR-related orphan receptor alpha, Nr1f1 300807 1.88 0.0001
Lxra Liver X receptor alpha, Nr1h3 58852 1.52 0.0006

* t-test.

Brenner and Gulko

Brenner and Gulko BMC Genomics 2012 13:710   doi:10.1186/1471-2164-13-710

Open Data