Table 1

Genes with ≥10-fold reduction in expression in DA.F344(Cia5a) compared with DA
Symbol Name Entrez Gene ID Fold reduction p-value
Tnn Tenascin N 304913 71.69 8.6x10-13
Mmp9 Matrix metallopeptidase 9 81687 32.79 1.4x10-9
Cdc2 Cell division cycle 2, G1 to S and G2 to M 54237 24.16 1.6x10-5
Mmp3 Matrix metallopeptidase 3 171045 23.94 5.0x10-5
Ccnb2 Cyclin B2 363088 22.95 5.0x10-6
Cthrc1 Collagen triple helix repeat containing 1 282836 17.93 3.2x10-9
Col12a1 Collagen, type XII, alpha 1 25683 16.25 7.6x10-8
Slpi Secretory leukocyte peptidase inhibitor 84386 16.16 6.4x10-4
Spc24 SPC24, NDC80 kinetochore complex component, homolog 363028 14.72 2.5x10-6
Emilin1 Elastin microfibril interfacer 1 298845 13.55 2.4x10-6
Prc1 Protein regulator of cytokinesis 1 308761 13.08 1.6x10-5
Emb Embigin 114511 12.82 1.4x10-5
Nuf2 NUF2, NDC80 kinetochore complex component, homolog 304951 12.52 2.5x10-6
Lbp Lipopolysaccharide binding protein 29469 11.82 8.0x10-5
Cks2 CDC28 protein kinase regulatory subunit 2 498709 11.62 5.9x10-6
Wisp1 WNT1 inducible signaling pathway protein 1 65154 11.59 9.0x10-8
Cxcl1 Chemokine (C-x-C motif) ligand 1 81503 10.88 4.3x10-4
Steap1 Six transmembrane epithelial antigen of the prostate 1 297738 10.61 1.7x10-4
LOC687334 Similar to cytoskeleton associated protein 2 687334 10.16 9.1x10-6

Brenner and Gulko

Brenner and Gulko BMC Genomics 2012 13:710   doi:10.1186/1471-2164-13-710

Open Data