Table 1

TF genes related to BPH-induced resistance (fold change >10; P<0.05)
No Family Gene ID T8/T0 T24/T0 R8/R0 R24/R0
FC RP FC RP FC RP FC RP
1 ABI3VP1 Os03g0164300 10.14 U 10.28 U 1.50 U 4.31 U
2 AP2-EREBP Os01g0224100 1.91 D 12.40 D 2.66 D 1.53 D
3 AP2-EREBP Os03g0860100 19.22 U 8.30 U 2.13 U 2.08 U
4 bZIP Os03g0336200 4.37 U 10.25 U 1.55 U 3.08 U
5 C2C2-CO-like Os09g0240200 29.47 D 1.22 D 3.57 D 1.83 U
6 C2H2 Os03g0437200 10.14 U 3.27 U 2.00 U 1.67 U
7 FAR1 Os08g0389800 7.46 U 11.87 U 1.36 U 1.36 D
8 FHA Os12g0124000 14.24 D 1.23 D 3.91 D 1.38 D
9 GRAS Os01g0948200 14.58 U 6.82 U 1.30 D 2.28 U
10 HB AK064665 8.88 D 14.77 D 2.18 D 3.32 D
11 NAC Os02g0214500 10.52 U 6.62 U 1.27 D 2.11 D
12 RWP-RK Os09g0549450 2.69 D 10.01 D 1.39 D 2.83 D
13 Tify Os03g0180800 10.45 U 1.51 U 4.29 U 3.75 U
14 WRKY Os03g0335200 6.85 U 10.14 U 2.13 U 2.02 U
15 AP2-EREBP Os07g0410700 5.35 U 1.73 U 10.02 U 3.12 U
16 C2C2-CO-like Os06g0298200 34.79 U 1.41 U 23.97 U 1.02 U
17 C2C2-CO-like Os09g0509700 11.88 U 2.39 U 5.49 U 2.53 U
18 G2-like Os01g0971800 1789.73 U 1.71 U 804.09 U 2.39 U
19 HSF Os01g0733200 32.45 U 2.64 U 45.58 U 3.06 U
20 MBF1 Os06g0592500 12.14 D 1.58 D 5.60 D 2.77 D
21 MYB-related Os08g0157600 45.27 D 2.13 U 47.13 D 1.70 U
22 Orphans Os04g0493000 5.34 D 2.08 U 12.51 D 1.54 U
23 Sigma70-like Os05g0586600 24.58 D 2.50 U 92.84 D 1.87 U
24 Sigma70-like Os05g0586600 38.02 D 2.82 U 53.11 D 1.50 U
25 GNAT Os03g0205800 5.79 U 10.28 U 5.43 U 6.77 U
26 MADS Os12g0501700 29.97 U 86.44 U 5.79 U 12.58 U
27 MYB-related Os05g0579600 52.39 D 28.25 D 7.56 D 13.03 D
28 MYB-related Os06g0728700 9.13 D 6.10 U 16.15 D 3.19 U
29 NAC Os12g0477400 7.13 U 22.52 U 2.00 U 8.33 U
30 NAC Os11g0126900 3.56 U 11.59 U 1.06 D 6.55 U
31 HB Os03g0109400 5.61 U 17.60 U 3.09 U 7.98 U
32 HMG Os02g0258200 1.02 U 7.29 D 14.23 D 7.63 D
33 MYB-related Os02g0685200 2.34 D 10.57 U 5.75 D 3.37 U
34 PHD Os06g0187000 1.10 U 6.72 D 22.53 D 3.62 D
35 GRAS Os06g0127800 1.14 U 3.59 D 30.11 D 7.77 D
36 GRF Os02g0678800 1.39 U 1.75 D 11.22 D 2.60 D
37 HB Os10g0575600 1.78 U 1.62 D 12.97 D 1.25 D

* T0 and R0 refer to rice cultivars TN1 and RHT before attack by BPH (0 h); T8, T24, R8, and R24 refer to the same cultivars sampled 8 or 24 h after attack by BPH; FC, fold change; RP, regulation pattern; U, up-regulation; D, down-regulation.

Wang et al.

Wang et al. BMC Genomics 2012 13:687   doi:10.1186/1471-2164-13-687

Open Data