Table 4

Distribution of protease clans and families in Eimeria tenella, its host and other protozoan parasites
Clan Family G.g E.t T.g C.p C.h C.m P.f P.v P.b P.c P.y T.a T.p E.d L.b L.i L.m T.b T.c T.v G.i
AA A1 11 3 8 4 3 6 11 6 5 3 9 4 3 1
A2 3
A28 1 1 2 1 1 1 1 1 1 2 1 1 1 1 1 1 1 2 6
AD A22 6 1 1 1 1 1 1 1 1 4 2 2 2 2 2 4 2
CA C1 12 5 4 5 4 4 10 9 8 4 8 12 10 15 3 4 3 2 7 42 21
C2 12 1 2 1 1 2 1 2 2 1 1 1 2 2 2 1 2 4
C12 4 2 2 2 1 2 1 2 2 2 1 2 2 2 1
C19 30 8 1 7 3 2 7 1 2 3 4 5 1 1 3 1 9 8 3 68 4
C51 1 1 2 3 2
C54 3 1 1 1 4 2 2 2 2 2 5
C64 4
C65 1 1 1 1 1 1
C66 1
C67 2
C78 1 1 1 1 1 1 1 1 1 1 1
C85 2 1 1 1 2 1 1 1
C86 2 1 1 1 1 1 1 1 1
C88 1 1 1 1 1 1 1 1 1 1
CD C11 1 1 1
C13 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 9 2
C14 12 2 1 1 1 1 1 1 1 1 1 2 2 6
C50 1 1 1 1 1 1 1 1 1 1 1
CE C48 6 3 2 1 1 1 1 1 2 2 2 2 1 1 1 6
CF C15 2 1 1 1 1 1
CO C40 6
M- M49 1 1 1 1 1 2
M76 1 3 1 1 1 1 1 1 1 1 1 2
M79 1 1 1 1 1 2 1 1
MA M1 10 2 3 1 1 1 1 1 1 1 1 1 1 2 2 4 2 3 3
M2 3
M3 3 3 2 2 2 2 3 1 2 3 3 4 2 3 1
M8 1 1 24 8 4 9 76 42
M10 16
M12 35
M13 8 1
M32 2 3 4 1 2
M41 1 3 3 1 1 3 3 3 3 4 3 3 1 5 5 5 5 1
M43 2
M48 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4
M54 1 1 1 1
M80 1 1 1 1 1 1 1 1
MC M14 14 1 1 1 1 2 2 3 3 3 4
ME M16 12 5 7 8 4 4 4 3 4 1 4 5 4 2 2 3 3 3 3 7 3
MF M17 3 1 1 1 1 1 1 1 1 3 2 1 1 3 3 3 3 3
MG M24 6 3 2 3 2 5 4 4 3 5 4 4 3 3 3 4 4 4 8 3
MH M18 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5
M20 4 1 1 6 3 4 7 4 8 10 3
M28 10 1 1
MJ M19 1
M38 4
MK M22 2 1 1 1 1 1 2 1 1 1 2 2 1 1 1 1 1 1 1 1 2
MM M50 1 1 1
MP M67 7 2 2 2 1 1 1 1 1 1 2 2 2 2 2 3 1 3 4 2
PA S1 66 3 4 1 2 1
SB S8 10 6 11 1 1 3 3 2 2 2 1 2 2 11
SC S9 15 4 10 3 2 3 1 1 2 2 1 2 5 4 7 8 8 8 5
S10 2 1 1 1 3 1
S15 1 1 1 1 1
S28 1 1 2 1 8 2
S33 3 1 2 3 1 6 1 1 4 1 1 2 1 2 1 2 13 7
SE S12 1
SF S26 4 1 1 1 1 1 1 1 2 2 1 2 2 2 2 1 3
SJ S16 2 1 1 1 1 1 1 1 1
SK S14 1 1 1 1 1 1 2 1
S41 1
SP S59 1 1 1 1
SR S60 1
ST S54 6 1 6 3 2 3 7 2 4 2 5 1 1 1 2
Clan Family G.g E.t T.g C.p C.h C.m P.f P.v P.b P.c P.y T.a T.p E.d L.b L.i L.m T.b T.c T.v G.i

The distribution of families within clans of aspartic (AA, AD), cysteine (CA, CD, CE, CF, CO), metallo (M-, MA, MC, ME, MF, MG, MH, MJ, MK, MM, MP) and serine (PA, SB, SC, SE, SF, SJ, SK, SP, SR, ST) proteases of Eimeria tenella is compared with its host (Gallus gallus, the chicken) and other protozoan parasites from the MEROPs database of peptidases in whole genome sequences (merops.sanger.ac.uk/cgi-bin/compgen_index?type=P; [34]). Sequences for non-peptidase homologs are not included in the table. G.g = Gallus gallus; E.t = Eimeria tenella; T.g = Toxoplasma gondii; C.P. = Cryptosporidium parvum; C.h = Cryptosporidium hominis; C.m = Cryptosporidium muris; P.f = Plasmodium falciparum; P.v = Plasmodium vivax; P.b = Plasmodium berghei; P.c = Plasmodium chabaudi; P.y = Plasmodium yoelii; T.a = Theileria parva; P.a = Theileria annulata; E.d = Entamoeba dispar; L.b = Leishmania braziliensis; L.i = Leishmania infantum; L.m = Leishmania major; T. b = Trypanosoma brucei; T.c = Trypanosoma cruzi; T. v = Trichomona vaginalis; G.i = Giardia intestinalis.

Katrib et al.

Katrib et al. BMC Genomics 2012 13:685   doi:10.1186/1471-2164-13-685

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