Table 6

List of primers used for functional markers
Sequence (5→3)
Forward Reverse
Anthocyanin biosynthesis
CHS Chalcone synthase TGTGCAAAGTTGATTTTATTCGAC ATGTCAGAAAGGAGGGTCCAATGG
CHI Chalcone isomerase GAGTGGTTAAGCAGATGACACGAC AAGAAAATTGACAACATGCAGAAG
FHT Flavanone 3-hydroxylase TTGCACCTGAAGTAGAATTTTACA TTCTGACAGAACTTCAAGCAATTT
F35H1 Flavonoid 3,5-hydroxylase TCCATTGATTAAAATGAGGGACCA TATGGTAAGTTGGGGATGTCTGAT
ANS Anthocyanidin synthase ATGTCAACTTTTTATTGGTCCTAA GAGCACAGCAAGAACTTTGGTAGC
MYB3 Transcription factor CAATGCAGCAACATTTACACTACTCCCA AAGAATCCATGAATGTAGCAGCAGCATC
bHLH1 Transcription factor AAGGTGATCGTTGTGAAAATGTCT GGCCGTCTAGTTTGGTGGTTGGTT
Flowering time
FT1 Flowering locus T CCTCAGGGAATACCTGCACTGTTT ATCCCTCTAAAGTTTAGGTGTGTTATAAG
FT2 Flowering locus T TCTTTGACTCTCTTGCTTTCTTGATGA ACCATCTTTCTACGACCGTTGCAT
TFL1 Terminal flowering 1 AAGATTATGGATTTGTACTCTTAGTCT TAACTAATGATAAGATTATGTGAAG
W14/15 Esterase CTAGTCTCTACCATTTGTCCC TCTACAAACAATGCACCTGG

Nakatsuka et al.

Nakatsuka et al. BMC Genomics 2012 13:672   doi:10.1186/1471-2164-13-672

Open Data