Table 5

Description of 95 unique S. sclerotiorum EST contigs with putative involvement in virulence or pathogenicity
Seq.Name Seq.Description Seq.Length min.e-value mean Similarity
4 genes involved in the recognition of the host and in signaling pathway
1457 c2h2 type zinc finger containing protein 222 2.2E-35 75.5%
1796 guanine nucleotide-binding protein alpha subunit 171 2.7E-17 95.0%
3623 importin beta-2 109 1.2E-09 85.7%
6785 c2h2 transcription factor 135 2.8E-19 79.9%
18 genes affecting biosynthesis and the integrin of fungal cell walls
330 alpha-1,2-mannosyltransferase kre5 196 8.4E-19 70.9%
2296 cell wall biogenesis protein glutathione transferase 122 2.8E-14 90.5%
2424 endoglucanase-4 precursor 326 6.4E-27 76.0%
2930 alpha-1,2-mannosyltransferase alg11 154 1.7E-22 95.3%
3362 alpha-glucan-branching enzyme 234 6.8E-29 82.6%
3825 alpha-mannosyltransferase 248 3.4E-41 71.1%
4843 dolichol-phosphate mannosyltransferase 253 1.9E-34 87.1%
5737 endoglucanase ii 122 8.7E-16 86.0%
5773 dolichol-phosphate mannosyltransferase 255 1.9E-26 89.7%
6654 endochitinase 42 189 1.5E-28 87.0%
6797 chitinase 105 2.3E-11 79.9%
6956 endoglucanase ii 267 6.8E-45 86.7%
7397 gpi-anchored cell wall beta-1,3-endoglucanase 159 3.0E-24 69.3%
8474 af215732_1class iv chitin synthase 113 2.0E-07 86.0%
8681 chitin synthase 138 2.0E-20 95.6%
8785 mannan polymerase ii complex anp1 subunit [61] 173 8.6E-24 92.8%
9176 gpi-anchored cell wall beta-1,3-endoglucanase 295 9.2E-34 66.5%
9570 mannosyl transferase 122 3.3E-15 82.6%
12 genes involved in the production of infection structures
97 siderophore biosynthesis 106 5.9E-12 81.5%
239 mannosyl transferase 221 1.3E-22 94.3%
253 adenylate kinase 140 6.3E-19 88.3%
427 serine threonine-protein phosphatase pp2a catalytic subunit 289 4.9E-51 99.4%
1554 adenylate cyclase 135 1.4E-18 83.2%
4181 mfs toxin efflux pump 194 1.1E-21 69.4%
5419 alcohol dehydrogenase 190 3.4E-28 75.7%
5981 adp-ribosylation factor 1 455 7.3E-23 93.7%
6192 adp-ribosylation factor 1 103 3.5E-12 100.0%
6325 nadp-dependent alcohol dehydrogenase 347 4.0E-53 82.8%
7407 1-phosphatidylinositol phosphodiesterase 102 9.2E-05 76.0%
9579 alcohol oxidase 112 9.7E-15 90.7%
39 genes involved in the penetration of the cuticle and cell wall
47 cellulose 1,4-beta-cellobiosidase 165 7.3E-23 77.1%
473 xyloglucan-specific endo-beta-1,4-glucanase precursor 228 7.6E-36 84.0%
485 cutinase 375 2.5E-63 68.5%
555 endo-1,4-beta-xylanase 265 3.8E-19 79.3%
717 endo-1,4-beta-xylanase 348 2.8E-62 78.4%
970 acetyl xylan 118 2.3E-16 73.5%
1533 endopolygalacturonase 2 181 1.3E-27 89.5%
1562 carbohydrate esterase family 1 and carbohydrate-binding module family 1 protein 241 4.4E-28 76.1%
2427 4-coumarate:CoA ligase 185 1.8E-29 79.8%
2450 acetolactate synthase 236 1.9E-39 93.3%
3006 aspartic-type endopeptidase 171 1.5E-23 71.2%
3115 fungal alpha-l-arabinofuranosidase 110 3.1E-13 91.6%
3147 extracellular exo-polygalacturonase 269 1.5E-12 83.5%
3513 beta-xylosidase 219 9.1E-37 84.6%
3712 feruloyl esterase b 187 1.7E-27 78.6%
3861 pectin methylesterase 170 2.4E-26 80.0%
3907 extracellular endo-1,5-alpha-l-arabinosidase A 172 1.6E-25 80.0%
4037 aspartic endopeptidase 129 3.2E-18 82.4%
4295 cutinase 278 2.6E-36 66.3%
4446 xyloglucan-specific endo-beta- -glucanase precurso 626 8.3E-89 77.3%
5554 beta-glucosidase 1b 267 8.0E-46 83.7%
5562 alpha-l-arabinofuranosidase 130 1.1E-15 74.2%
5679 polygalacturonase 1 427 9.8E-60 96.6%
5918 acetyl xylan esterase 345 5.1E-16 84.0%
6412 exoglucanase 2 precursor 141 4.8E-19 90.3%
6383 alpha-L-arabinofuranosidase A 130 1.1E-13 78.3%
6431 exopolygalacturonase 135 1.3E-16 89.0%
6759 endo-1,4-beta-xylanase 359 8.8E-45 81.1%
6824 pectin methylesterase 107 3.1E-13 79.7%
7085 pectinesterase family protein 109 7.7E-12 82.5%
7661 polygalacturonase 1 601 3.9E-45 93.2%
7834 extracellular exo-polygalacturonase 386 3.0E-61 68.0%
8501 pectin methylesterase 252 1.6E-41 62.5%
9093 carbohydrate esterase family 8 protein 244 9.4E-31 71.6%
9509 extracellular endo-1,5-alpha-l-arabinase 322 2.0E-36 74.7%
9525 cellulase family protein 239 1.8E-37 72.8%
9583 acetolactate synthase 123 1.3E-16 90.6%
9655 acetyl xylan esterase 129 2.3E-16 82.8%
10069 endopolygalacturonase 2 460 1.2E-73 91.7%
9 genes involved in responding to host immune system
1220 efflux transporter 120 1.9E-15 80.3%
4783 abc bile acid transporter 142 1.6E-17 72.5%
5659 mfs transporter 236 8.0E-38 80.8%
6180 ATP-binding cassette transporter 229 1.7E-40 81.1%
6538 glutathione transferase 486 3.7E-91 70.2%
7926 glutathione s-transferase ure2-like protein 123 1.3E-16 79.8%
8029 ornithine decarboxylase 234 9.5E-39 90.3%
8188 glutathione s-transferase 527 6.5E-100 79.7%
9716 salicylate hydroxylase 202 5.4E-34 85.8%
3 genes involved in fungal nutrition (virulence-associated)
1446 methionine aminopeptidase 2 337 7.2E-47 84.8%
1889 vacuolar atpase proteolipid subunit c 314 2.6E-23 92.5%
5131 vacuolar atpase proteolipid subunit c 157 3.1E-21 90.4%
Others 10 genes related with pathogen virulence or pathogenicity
145 acid proteinase 583 1.8E-89 63.5%
1387 methylcitrate synthase precursor 182 1.7E-27 96.2%
2840 centromere kinetochore protein 217 4.1E-34 73.0%
3499 vacuolar protein 8 255 7.7E-28 97.4%
3747 acid proteinase 246 6.5E-40 66.9%
5648 dipeptidyl peptidase 226 1.2E-12 83.1%
7192 alpha-amylase precursor 207 2.9E-32 62.7%
7273 vanillyl-alcohol oxidase 146 5.3E-21 80.3%
10090 phospholipase d active site motif protein 235 3.3E-39 69.9%
10153 alpha-ketoglutarate dependent xanthine dioxygenase 249 1.2E-41 87.6%

Zhuang et al.

Zhuang et al. BMC Genomics 2012 13:668   doi:10.1186/1471-2164-13-668

Open Data