Table 1

Number of total and mapped reads (in millions) per sample
Mapped reads (%)
Sample Reads Transcripts rRNA Other* Unmapped (%)
AfrFemale-R1 24.6 18.7 (75.8) 2.3 (9.2) 3.5 (14.3) 0.20 (0.81)
AfrFemale-R2 44.4 31.6 (71.1) 7.5 (17.0) 5.0 (11.1) 0.37 (0.82)
AfrMale-R1 29.4 20.0 (71.3) 5.0 (16.9) 3.3 (11.1) 0.23 (0.80)
AfrMale-R2 28.6 21.3 (74.5) 3.8 (13.4) 3.0 (10.5) 0.46 (1.60)
EurFemale-R1 27.2 18.3 (67.2) 5.7 (20.7) 2.7 (10.1) 0.54 (1.97)
EurFemale-R2 23.5 16.8 (71.3) 3.8 (16.0) 2.8 (11.8) 0.22 (0.94)
EurMale-R1 48.4 32.3 (66.6) 8.2 (16.9) 4.8 (10.0) 3.16 (6.53)
EurMale-R2 47.3 34.4 (72.7) 6.9 (14.6) 5.2 (11.1) 0.78 (1.64)

*Includes intergenic regions, introns, transposable elements, non-coding RNA (excluding rRNA), and pseudogenes.

Catalán et al.

Catalán et al. BMC Genomics 2012 13:654   doi:10.1186/1471-2164-13-654

Open Data