Gene families shared between Rosa chinensis, Fragaria vesca, Prunus persica and Arabidopsis thaliana. OrthoMCL program was used to identify gene families shared between the four species using the following BLASTp parameters : P-value Cut-off 1e-05; Percent Identity Cut-off 0 [−F F] (i.e. low complexity filter inactivated). To increase confidence, a percent Match Cut-off 80 (i.e. Query and Match had to overlap on more than 80% of the query and match sequence length) filter was performed on the BLAST results.
Dubois et al. BMC Genomics 2012 13:638 doi:10.1186/1471-2164-13-638