The ML phylogenetic tree of mitochondrial protein coding genes, cox1 and cob, from 17 apicomplexans.Crypthecodinium cohnii was used as an outgroup. Concatenated amino acid sequences (696 sites) were used with 1,000 heuristic replicates under a Jones Taylor, and Thornton model  (α = 0.69) for constructing this tree. Numbers shown along nodes represent bootstrap values.
Hikosaka et al. BMC Genomics 2012 13:622 doi:10.1186/1471-2164-13-622