Table 1

Summary statistics from the dataset on synonymous and non-synonymous sites across all loci of Eichhornia
(A)
Site class Nsites S K θW
Synonymous 975202 19570 90113 0.0097 (0.012)
Non-synonymous 3339788 10549 41232 0.0015 (0.0022)
(B)
E. paradoxa Jamaica Nicaragua Brazil
E. paradoxa -
Jamaica 142,005.5 -
Nicaragua 142,579.5 17,201 -
Brazil 142,113 17,018.5 15,485 -

(A) The number of aligned sites (Nsites), the number of polymorphic sites (S), the number of divergent sites (K) and Watterson’s polymorphism estimator (θW). (B) Number of pairwise differences between the four individuals. Note that values are the average of the pairwise comparisons of the unphased haplotypes, thus explaining why in some case the number are not integers.

Ness et al.

Ness et al. BMC Genomics 2012 13:611   doi:10.1186/1471-2164-13-611

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