Table 6

Summary of full-length transcript identification after manual inspection
Number
Potential full-length transcripts 16,869
Full-length transcripts 14,240
Transcripts lack at 5' end 1,725
Transcripts lack at 3' end 711
Transcripts with incorrect ORFs 193

A total of 16,869 potential full-length transcripts that matched 90% length of reference proteins were selected for manual inspection. Full-length transcripts were defined as transcripts contain a complete CDS if the ORF revealed a start codon and stop codon in agreement with the match in the database.

Liu et al.

Liu et al. BMC Genomics 2012 13:595   doi:10.1186/1471-2164-13-595

Open Data