Table 6

Mapping of the pig cDNA clones sequenced in this study on pig chromosomes
Chromosome Forward Reverse Total
Clones Loci Clones Loci Clones Loci
1 1128 (164) 560 (134) 1197 (133) 594 (112) 2325 (297) 1154 (246)
2 1144 (138) 564 (123) 1180 (161) 563 (134) 2324 (299) 1127 (257)
3 744 (97) 380 (87) 871 (121) 468 (99) 1615 (218) 848 (186)
4 748 (88) 366 (71) 793 (96) 385 (81) 1541 (184) 751 (152)
5 710 (86) 310 (63) 685 (77) 313 (65) 1395 (163) 623 (128)
6 1184 (174) 552 (133) 1040 (130) 539 (115) 2224 (304) 1091 (248)
7 1013 (117) 437 (98) 1118 (125) 397 (97) 2131 (242) 834 (195)
8 563 (69) 267 (58) 393 (50) 209 (44) 956 (119) 476 (102)
9 699 (94) 339 (72) 673 (85) 339 (75) 1372 (179) 678 (147)
10 409 (48) 167 (37) 362 (37) 169 (32) 771 (85) 336 (69)
11 225 (26) 119 (25) 237 (22) 129 (20) 462 (48) 248 (45)
12 723 (89) 334 (76) 667 (68) 328 (60) 1390 (157) 662 (136)
13 922 (124) 431 (101) 890 (93) 467 (80) 1812 (217) 898 (181)
14 894 (101) 405 (80) 920 (116) 424 (90) 1814 (217) 829 (170)
15 568 (79) 281 (64) 518 (61) 247 (55) 1086 (140) 528 (119)
16 266 (35) 137 (26) 252 (39) 123 (35) 518 (74) 260 (61)
17 607 (70) 212 (59) 365 (47) 190 (38) 972 (117) 402 (97)
18 325 (32) 144 (29) 354 (38) 151 (30) 679 (70) 295 (59)
X 364 (56) 195 (49) 402 (73) 203 (55) 766 (129) 398 (104)
Y 5 (0) 2 (0) 1 (0) 1 (0) 6 (0) 3 (0)
Unplaced scaffolds 1854 (308) 747 (156) 1417 (162) 706 (135) 3271 (470) 1453 (291)
Total 15,095 (1995) 6949 (1541) 14,335 (1734) 6945 (1452) 29,430 (3729) 13,894 (2993)

Numbers of cDNA clones and the corresponding independent loci mapped on the pig genome are shown for each chromosome. “Forward” and “Reverse” indicate that the cDNA clones are aligned on the chromosomes in the orientation from pter to qter and from qter to pter, respectively. Numbers in parentheses show clones derived from pigs cloned from a female subjected to genome sequencing by the International Swine Genome Sequencing Consortium (Duroc 2–14).

Uenishi et al.

Uenishi et al. BMC Genomics 2012 13:581   doi:10.1186/1471-2164-13-581

Open Data