Table 3

A selection of paralogous families of P. acidipropionici and close related genomes
Cluster functional annotation Number of proteins found in:
P. acidipropionici P. acnes P. freudenreichii M. phosphovorus
ABC transporters 54 45 34 59
ABC transporters 20 11 1 13
ABC transporters 18 9 1 12
ABC transporters 9 8 4 19
ABC transporters 8 2 4 3
ABC transporters 7 3 2 6
ABC transporters 7 3 2 6
ABC transporters 5 1 2 1
ABC transporters 4 2 1 1
MFS transporters 10 3 10 21
Proton antiporters 3 1 1 2
Anaerobic C4-dicarboxylate transporters 0 2 2 0
Two-component system regulators 24 13 14 48
Two-component system kinases 8 3 4 11
Transcriptional regulators 27 10 4 22
Transcriptional regulators 9 5 5 12
Transcriptional regulators 5 2 1 1
MarR family transcriptional regulators 7 4 4 13
ArsR family transcriptional regulators 3 1 3 20
Oxidoreductases 23 9 8 29
Oxidoreductases 12 8 10 36
Oxidoreductases 12 4 4 21
Oxidoreductases 11 5 7 21
Dehydrogenases 8 2 4 15
Catalases 1 1 1 0
Catalases 1 0 0 1
Glycerol-3-phosphate dehydrogenases 2 1 1 0
Glutathione S-transferases 3 0 1 1
Aminotransferases 8 3 5 8
Aminotransferases 4 1 1 1
Amidotransferases 3 1 1 1
Glycosyl transferases 6 4 3 1
Glycosyl transferases 3 1 0 0
Sugar kinases 4 2 2 0
Polyphospate kinases 1 1 1 1
Polyphospate kinases 2 1 1 1 3
Polyphosphate-dependent glucokinases 1 1 1 2
Lipase esterases 3 1 0 0
Alpha-galactosidase 3 0 0 1
Putative sucrose-6-phosphate hydrolases (invertases) 1 0 0 2
Plasmid maintenance system antidote proteins 3 0 0 0
DNA-binding proteins 2 0 0 11
HNH endonucleases 6 0 0 0
HNH endonucleases 2 0 0 0
Hypothetical proteins 5 1 1 0
Hypothetical proteins 5 0 0 0
Hypothetical proteins 4 3 0 2
Hypothetical proteins 3 0 0 1
Methylases 0 0 2 2
S-layer proteins 0 0 2 0
cAMP factors 0 5 0 0
Adhesion proteins 0 4 0 0
Magnesium chelatase 0 2 0 1
Alpha-L-fucosidases 0 2 0 1
Sialic acid transporters 0 2 0 0
Endoglycoceramidases 0 2 0 0
Adhesion proteins 0 2 0 0
Lysophospholipases 0 2 0 0
Triacylglycerol lipase precursors 0 2 0 0

Parizzi et al.

Parizzi et al. BMC Genomics 2012 13:562   doi:10.1186/1471-2164-13-562

Open Data