Table 3

Distribution of ChIP-seq peaks with respect to the repeats found in centromeric contigs in the tammar assembly
Repeat class CENP-A ChIP-seq peaks
Simple 1
LTR/ERVK 2
LINE/RTE-BovB 6
DNA/En-Spm 9
DNA/Chapaev 14
SINE 16
Unknown satellite 18
LINE/CR1 22
LINE/L2 32
LINE/L1 193
SINE/MIR 195
buffer* 368

*de novo repeat.

Lindsay et al.

Lindsay et al. BMC Genomics 2012 13:559   doi:10.1186/1471-2164-13-559

Open Data