Table 1
Significantly expressed miRNAs in white and brown alpaca skin
miR-name NEL in brown NEL in white FC
White alpaca
miR-202 1.9927 95.2234 47.7861
miR-424* 0.1573 1.6633 10.5741
miR-542-5p 0.3146 2.8514 9.0636
miR-424 3.2512 25.1870 7.7470
miR-370 0.5244 3.6236 6.9100
miR-22-3p 207.9226 1354.8698 6.5162
miR-27a-3p 71.6323 429.4856 5.9957
miR-450 2.0976 12.0589 5.7489
miR-34c 11.3794 56.1955 4.9383
miR-122 5.9781 28.0977 4.7001
miR-136 0.3146 1.2475 3.9653
miR-493 0.8915 3.2672 3.6648
miR-216a 2.9366 10.0986 3.4389
miR-671 2.0976 6.8908 3.2851
miR-494 1.0488 3.0890 2.9452
miR-190a 4.2476 11.7024 2.7551
miR-18a 4.2476 11.5836 2.7271
miR-124a 0.7866 2.1385 2.7187
miR-124b 0.7866 2.1385 2.7187
miR-148a 1653.0499 4265.9865 2.5807
miR-206 2.7269 6.8908 2.5270
miR-204 1.8354 4.6335 2.5245
miR-369-3p 3.4610 8.7323 2.5231
miR-345-3p 1.6256 4.0394 2.4849
miR-193a-3p 0.5768 1.4257 2.4718
miR-874 0.8915 2.1385 2.3988
miR-19a 2.3073 5.4057 2.3429
miR-143 10818.3706 24308.7093 2.2461
miR-1296 1.4683 3.2672 2.2252
miR-210 3.6708 7.9006 2.1523
miR-301a 0.839 1.7821 2.1241
miR-27a-5p 55.009 112.8662 2.0518
miR-146b 25987.7501 53201.0343 2.0472
miR-200a 79.708 162.1709 2.0346
miR-17-3p 3.9854 8.0788 2.0271
Brown alpaca
miR-211 47.4053 2.9108 16.2860
miR-184 232.0447 22.2762 10.4167
miR-486 983.9221 151.6565 6.4878
miR-885 5.1915 0.9505 5.4619
miR-451 1122.4147 411.0706 2.7305
miR-133a 4.1427 1.6039 2.5829
miR-299 1.7829 0.7128 2.5013
miR-23a 708.5623 304.5606 2.3265
miR-25 504.2581 226.8017 2.2233
miR-23b-3p 823.9292 371.211 2.2196
miR-1224 6.6598 3.0296 2.1982
miR-15b 121.5547 58.5716 2.0753
miR-193b 207.1360 100.4509 2.0620

Nel, normalized expression level of miRNA in a sample; FC, fold change of miRNAs between white and brown alpaca skin; Nel = actual miRNA count/total count of clean reads×1000000.

Tian et al. BMC Genomics 2012 13:555   doi:10.1186/1471-2164-13-555

Open Data