Table 2

Integration analysis of ESTs/genes with previously reported quantitative trait loci (QTL) related to fiber quality*
Chromosome qFE qFL qFF qFS qFU QTL Total ESTs/genes
A1(Chr.1) 1 0 1 0 1 3 4
A2(Chr.2) 0 1 0 0 0 1 2
A3(Chr.3) 0 1 0 0 0 1 1
A4(Chr.4) 0 0 0 0 0 0 0
A5(Chr.5) 0 0 0 0 1 1 2
A6(Chr.6) 1 0 1 0 1 3 3
A7(Chr.7) 0 0 0 0 0 0 0
A8(Chr.8) 3 0 3 3 1 10 40
A9(Chr.9) 0 4 1 2 1 8 11
A10(Chr.10) 0 0 0 0 0 0 0
A11(Chr.11) 3 1 0 0 1 5 26
A12(Chr.12) 0 0 0 0 1 1 6
A13(Chr.13) 1 1 0 0 0 2 5
D1(Chr.15) 0 0 0 0 1 1 6
D2(Chr.14) 1 1 0 0 0 2 20
D3(Chr.17) 0 1 2 0 1 4 28
D4(Chr.22) 1 0 0 0 0 1 2
D5(Chr.19) 0 1 0 0 0 1 15
D6(Chr.25) 3 0 2 0 0 5 11
D7(Chr.16) 1 0 3 4 0 8 34
D8(Chr.24) 10 13 9 13 3 48 60
D9(Chr.23) 1 3 1 1 3 9 12
D10(Chr.20) 1 0 1 1 1 4 11
D11(Chr.21) 1 0 1 3 1 6 8
D12(Chr.26) 0 1 1 1 0 3 10
D13(Chr.18) 1 1 3 0 0 5 21
At 9 8 6 5 7 35 100
Dt 20 21 23 23 10 97 237
Total 29 29 29 28 17 132 337

* The fiber quality traits mainly included fiber length (FL), fiber strength (FS), fiber fineness (FF), fiber elongation (FE), and fiber uniformity (FU). QTL related to fiber quality traits were reported previously from references [39-53].

Zhao et al.

Zhao et al. BMC Genomics 2012 13:539   doi:10.1186/1471-2164-13-539

Open Data