Figure 5.

Recombination matrices for A) male and B) female LG3. Each is a heat map with recombination fraction below the diagonal and corresponding LOD score above the diagonal between all pairwise combinations of markers in LG3. Above the diagonal warmer colors (oranges, reds) are higher LOD scores with the highest scores being the darkest reds. Below the diagonal are recombination fractions with lower values in warmer colors. Note that majority of high values occur closer to the diagonal in the female and that the female has more recombination (higher recombination fractions in blue) overall.