Additional file 1.
Table S1. List of single-nucleotide polymorphisms (SNPs) that were significantly (random effects p-value < 10-4) associated with risk of follicular lymphoma (FL) in the meta-analysis of 592 FL cases and 1541 controls from Denmark/Sweden (SCALE) and the San Francisco Bay Area (SF-NHL2) studies. Table S2. Results for the 11 single-nucleotide polymorphisms (SNPs) selected for validation in an independent follicular lymphoma case–control study from the SF Bay Area (SF-NHL1). Table S3. Meta-analysis of the combined GWAS and validation datasets for the 11 SNPs selected for validation. Table S4. Logistic regression results for the validated SNPs in the SF-NHL2 and SCALE GWAS. P-values were computed in a logistic regression model with and without adjustment for established FL-associated SNPs. Table S5. Case–control frequencies and association p-values for the most frequent HLA-DPB1/rs3117222 haplotypes in the SF-NHL2 population.
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Skibola et al. BMC Genomics 2012 13:516 doi:10.1186/1471-2164-13-516