Table 2

Variants in virulence related genes
Gene Gene ID Position Ref base Alt base Substitution Invasive SSTI
immunoglobulin G binding protein A precursor SAUSA300_0113 128554 G T N380K 0 1
IucC family siderophore biosynthesis protein SAUSA300_0123 142320 G T S404I 1 0
sucrose-specific PTS tranporter protein SAUSA300_0194 226384 C T A153V 1 0
sucrose-specific PTS tranporter protein SAUSA300_0194 226642 G A G239D 0 1
choloylglycine hydrolase family protein SAUSA300_0269 321604 C A P194T 0 1
essC protein SAUSA300_0283 336391 G A E142K 0 1
essC protein SAUSA300_0283 336694 A G I243V 1 0
superantigen-like protein 5 SAUSA300_0399 451121 C A A7E 1 1
superantigen-like protein SAUSA300_0407 460962 TACAG ----- Frameshift 108 11 10
dimethyladenosine transferase SAUSA300_0470 530052 T A V258E 0 1
clumping factor A SAUSA300_0772 859497 C A A117D 0 1
enterotoxin Q SAUSA300_0801 884359 T - Frameshift 142 1 0
cysteine protease precursor SAUSA300_0950 1038844 A T V206E 0 1
fmt protein SAUSA300_0959 1051797 C T T269I 0 1
alpha-hemolysin precursor SAUSA300_1058 1157169 G T T53N 0 1
putative fibronectin/fibrinogen binding protein SAUSA300_1101 1204860 C A D555Y 0 2
putative enterotoxin type A SAUSA300_1559 1708640 C A E78* 1 0
cell wall surface anchor family protein SAUSA300_1702 1878567 G A P1968S 1 0
cell wall surface anchor family protein SAUSA300_1702 1878783 G C Q1896E 0 1
cell wall surface anchor family protein SAUSA300_1702 1878930 C A A1847S 0 1
cell wall surface anchor family protein SAUSA300_1702 1880436 C T E1345K 0 1
cell wall surface anchor family protein SAUSA300_1702 1880783 G A A1229V 0 1
serine protease SplA SAUSA300_1758 1943333 T C D113G 0 1
lantibiotic epidermin biosynthesis protein EpiC SAUSA300_1765 1950378 A G V209A 0 1
lantibiotic epidermin biosynthesis protein EpiB SAUSA300_1766 1953206 T - Frameshift 261 0 1
leukotoxin LukD SAUSA300_1768 1955543 C T V254I 1 0
leukotoxin LukE SAUSA300_1769 1957230 T C K4E 0 1
Aerolysin/leukocidin family protein SAUSA300_1975 2130674 G A A63V 1 0
Aerolysin/leukocidin family protein SAUSA300_1975 2130847 T - Frameshift 5 0 1
hyaluronate lyase precursor SAUSA300_2161 2338286 G T K65N 0 1
hyaluronate lyase precursor SAUSA300_2161 2340008 A T L639F 1 0
AcrB/AcrD/AcrF family protein SAUSA300_2213 2380381 - T Frameshift 1050 0 1
AcrB/AcrD/AcrF family protein SAUSA300_2213 2382879 A T L218* 0 1
teicoplanin resistance associated membrane protein TcaB protein SAUSA300_2301 2473522 C G W311C 0 1
IgG-binding protein SBI SAUSA300_2364 2540728 G A E150K 0 1
IgG-binding protein SBI SAUSA300_2364 2540773 C A Q165K 1 0
IgG-binding protein SBI SAUSA300_2364 2540911 G A V211M 1 1
gamma-hemolysin component A SAUSA300_2365 2542364 C A Q80K 1 0
gamma-hemolysin component C SAUSA300_2366 2543638 A G I6V 0 1
putative transporter SAUSA300_2406 2591556 A C M273R 2 0
clumping factor B SAUSA300_2565 2774393 C T G883R 0 1

Tewhey et al.

Tewhey et al. BMC Genomics 2012 13:508   doi:10.1186/1471-2164-13-508

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