Table 3 |
|||||
|
Pearson correlation coefficients (95% confidence intervals) of different iHS statistics with regression coefficients from association study for protein yield. |
|||||
|
Method |
SNPs with MAF < 10% |
all SNPs |
|||
|
all (N= 4,387) |
top 1% |iHS| (N = 42) |
all (N = 34,851) |
top 1% |iHS| (N = 349) |
top 0.1% |iHS| (N = 35) |
|
|
|
|||||
|
iHS |
0.045 |
0.197 |
0.091 |
0.466 |
0.559 |
|
(0.016-0.074) |
(-0.105-0.467) |
(0.080-0.101) |
(0.380-0.544) |
(0.277-0.751) |
|
|
iHSVoight [9] |
0.005 |
0.21 |
-0.005 |
0.002 |
0.228 |
|
(-0.025-0.034) |
(-0.092-0.31) |
(-0.0158-0005) |
(-0.107-0.102) |
(-0.114-0.521) |
|
|
|
|||||
|
Schwarzenbacher et al. BMC Genomics 2012 13:48 doi:10.1186/1471-2164-13-48 |
|||||
