Table 3

Pearson correlation coefficients (95% confidence intervals) of different iHS statistics with regression coefficients from association study for protein yield.

Method

SNPs with MAF < 10%

all SNPs

all (N= 4,387)

top 1% |iHS| (N = 42)

all (N = 34,851)

top 1% |iHS| (N = 349)

top 0.1% |iHS| (N = 35)


iHS

0.045

0.197

0.091

0.466

0.559

(0.016-0.074)

(-0.105-0.467)

(0.080-0.101)

(0.380-0.544)

(0.277-0.751)

iHSVoight [9]

0.005

0.21

-0.005

0.002

0.228

(-0.025-0.034)

(-0.092-0.31)

(-0.0158-0005)

(-0.107-0.102)

(-0.114-0.521)


Schwarzenbacher et al. BMC Genomics 2012 13:48   doi:10.1186/1471-2164-13-48

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