Additional file 1.

Figure S1. Length/quantity statistics of assemblies for odd values of K from 21 to 49. In each graph that has two plots, the blue describes the full set of contigs while the red describes only those contigs 500bp or over. Figure S2. Plot of squared coefficient of variation as produced by DESeq. Figure S3. Plot of the base variance as produced by DESeq. Figure S4. ECDF plots for the two samples as produced by DESeq. Table S1. Unique Sequence Descriptions for Up-Regulated Sequences at P < 0.01. Table S2. Unique Sequence Descriptions for Down-Regulated Sequences at P < 0.01. Table S3. Site history of hypoxia. Table S4. RIN values for RNA samples

Format: DOC Size: 1.3MB Download file

This file can be viewed with: Microsoft Word Viewer

Garcia et al. BMC Genomics 2012 13:474   doi:10.1186/1471-2164-13-474