Comparative genomic analysis of Geobacter sulfurreducens KN400, a strain with enhanced capacity for extracellular electron transfer and electricity production
Department of Microbiology, 203 Morrill Science Center IVN, University of Massachusetts, 639 North Pleasant Street, Amherst, MA, 01003, USA
BMC Genomics 2012, 13:471 doi:10.1186/1471-2164-13-471Published: 12 September 2012
Additional file 1:
Table S1. – KN400 genome; Table S2. – PCA genome; Table S3. – KN400 genes that lack an ortholog in the PCA strain; Table S4. – regions in the KN400 genome that lack an ortholog in the PCA strain; Table S5. – PCA genes that lack an ortholog in the KN400 strain; Table S6. – Gene ontology enrichment analysis; Table S7. – Regions in the PCA genome that lack an ortholog in the KN400 strain; Table S8. – Single nucleotide polymorphisms across the genome; Table S9. – Heavily mutated proteins; Table S10. – Polymorphisms in the genes of central metabolism; Table S11. – Polymorphisms in the cytochromes.
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Additional file 2:
Figure S1. Alignment of the genomes of G. sulfurreducens strain PCA and strain KN400. Figure S2. A large region of low similarity between the KN400 and PCA genomes.
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