Table 1

Characteristics of the sequence tags produced by WGP

Expected data

Raw data

Tag filtering

BAC filtering


Total number of tags

5,681,912

327,282

228,263

194,716

Total number of unique tags

97,293a

111,678

47,900

47,220

Average tag length (bp)

30.0

30.0

29.9

29.9

Number of BAC with tag

16,128

14,199

13,888

11,238

Average number of tag per BAC

58.4b

23.0

16.4

17.3

Average number of BAC sharing the same tag

9.6

2.9

4.8

4.1


a based on a average EcoRI sites density of 4,728 bp and a coverage of the BACs subset of 230 Mb.

b based on a average EcoRI sites density of 4,728 bp and an average BAC size of 138 Kb.

Philippe et al. BMC Genomics 2012 13:47   doi:10.1186/1471-2164-13-47

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