Sequence alignment between a superscaffold obtained after WGP tags integration and a reference sequence (ctg0079). The superscaffold was obtained after assembly of 454 unpaired reads of ctg0079 with WGP tags integration at 40X coverage. Each line of the superscaffold corresponds to a contig and each rectangle corresponds to ambiguous contigs orders. Contigs within a bin are not ordered. Red areas highlight errors in contigs and bin mergers in the superscaffolds compared to the reference sequence. In this example, there are 12 mergers of which 3 are erroneous.
Philippe et al. BMC Genomics 2012 13:47 doi:10.1186/1471-2164-13-47