Table 4

Representative genes significantly up- and down-regulated in roots of cowpea cultivar B301 13 days post-inoculation with S. gesnerioides race SG4z
Category Sequence ID Annotation Fold change P value
Defense related 33692796 class 5 chitinase -18.83 0.035
33650557 lipoxygenase -9.92 0.000
33650653 disease resistance response protein -9.84 0.005
33681057 peroxidase -9.63 0.001
33691436 pectate lyase -8.86 0.002
33674444 acidic chitinase -6.62 0.000
33664131 dehydration-responsive family protein -6.5 0.000
33692483 peroxidase -6.08 0.000
33680968 peroxidase precursor -5.67 0.004
33648572 peroxidase precursor -4.33 0.002
33681614 cytochrome P450 monooxygenase -4.19 0.000
33681310 ATP dependent copper transporter -2.89 0.03
33688073 phenylalanine ammonia lyase (PAL1) -2.06 0.04
Plant Growth Regulator 33669665 auxin efflux carrier protein -4.48 0.000
33654433 auxin-regulated protein -3.99 0.003
33656035 auxin-regulated protein (Aux28) -3.85 0.002
33672768 auxin efflux carrier protein 10 -3.85 0.024
33673426 IAA14 -3.41 0.001
33677822 auxin-responsive-like protein -3.14 0.001
33685840 gibberellin 2-oxidase -2.52 0.021
33692861 auxin influx carrier protein -2.45 0.005
33656492 aux/IAA protein -2.4 0.029
Cellular components 33654029 expansin -17.12 0.000
33672947 expansin -7.53 0.001
33679526 glucosyltransferase -3.88 0.000
33688119 beta-expansin -3.85 0.020
33651745 cellulose synthase-like protein CslG -3.01 0.022
33676145 peptidase C14, caspase catalytic subunit p20 -2.5 0.029
Cellular transport 33678156 multifunctional aquaporin 4.29 0.000
33671842 putative nitrate transporter NTL1 2.6 0.008
33690036 amino acid permease family protein 2.37 0.014
33673354 high affinity sulphate transporter 2.32 0.029
33664197 sugar transporter 1.95 0.031
33674339 putative ammonium transporter AMT2 1.61 0.028
33653963 putative amino acid or GABA permease 1.44 0.034
Cellular signal transduction 33662517 stress kinase 2.37 0.003
33659136 stress-inducible H1 histone-like protein 2.04 0.003

Huang et al.

Huang et al. BMC Genomics 2012 13:402   doi:10.1186/1471-2164-13-402

Open Data