Additional file 5.

First genes of operons with cre sites. Start codon and further coding sequences are shown in lowercase and intergenic regions in uppercase. Underlined – predicted cre boxes, bold – cre boxes known from the literature, solid box – promoter known from the literature, dotted box – predicted promoter, dark grey shadow - transcriptional start site (TSS) known from the literature, light grey shadow – predicted TSS.

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Marciniak et al. BMC Genomics 2012 13:401   doi:10.1186/1471-2164-13-401