Additional file 1 .
Table S1. Genes with enlarged 3' or 5' UTR boundaries as compared with the annotation of Bruno et al. 2010. Table S2. annotation and coordinates of new transcripts found based on our RNA seq data. Overlap with previously annotated transcripts are indicated (annotations taken from Candida Genome Database, Bruno et al., 2010; Sellam et al., 2010 and Tuch et al., 2010). Table S3. CDR Induced genes. Genes that were found significantly overexpressed in Gu5 by Deseq and EdgeR. Log2(ratios) are indicated, together with CGD descriptions. The CDR isolates column indicate the number of different isolates in which the gene was previously found to be overexpressed, based on the studies of Liu et al., 2007 and Znaidi et al., 2006. Table S4. List of the strains used in the study. Table S5. Sequences of the primers used in the study.
Format: PDF Size: 909KB Download file
This file can be viewed with: Adobe Acrobat Reader
Dhamgaye et al. BMC Genomics 2012 13:396 doi:10.1186/1471-2164-13-396