Open Access Highly Accessed Research article

Global transcriptome analysis of two wild relatives of peanut under drought and fungi infection

Patricia M Guimarães1*, Ana CM Brasileiro1, Carolina V Morgante2, Andressa CQ Martins3, Georgios Pappas1, Orzenil B Silva1, Roberto Togawa1, Soraya CM Leal-Bertioli1, Ana CG Araujo1, Marcio C Moretzsohn1 and David J Bertioli34

Author Affiliations

1 EMBRAPA Recursos Genéticos e Biotecnologia. Parque Estação Biológica, CP 02372 Final W5 Norte, Brasília, DF, Brazil

2 EMBRAPA Semi –Árido, BR 428, Km 152, Zona Rural - CP 23, Petrolina, PE, Brazil

3 Universidade de Brasília, Campus I, Brasília, DF, Brazil

4 Universidade Católica de Brasília, Campus II, 916 Norte, Brasília, DF, Brazil

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BMC Genomics 2012, 13:387  doi:10.1186/1471-2164-13-387

Published: 13 August 2012

Additional files

Additional file 1:

Consensus sequences of assembled contigs of A. stenosperma and bioinformatic annotation (BLASTX). The data represents the consensus sequences of 7,468 assembled contigs of A. stenosperma generated as a result of de novo assembly and the three best BLASTX scoring hits obtained as a result of comparison of A. stenosperma contig set against nr database of GenBank at an E value < e-7.

Format: XLS Size: 7.1MB Download file

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Open Data

Additional file 2:

Consensus sequences of assembled contigs of A. duranensis and bioinformatic annotation (BLASTX). The data represents the consensus sequences of 12,791 assembled contigs of A. duranensis generated as a result of de novo assembly and the three best BLAST X scoring hits obtained as a result of comparison of A. duranensis contig set against nr databse of GenBank at an E value < e-7.

Format: XLS Size: 11.8MB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

Additional file 3:

Bioinformatic annotation (BLASTX) of A. stenosperma contig set against Arabidopsis thaliana genome. This file contains the BLAST X results obtained as a result of comparison of A. stenosperma contig set against A. thaliana predicted NBS containing proteins.

Format: XLS Size: 44KB Download file

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Open Data

Additional file 4:

Sequence information of all SSR primer pairs designed using MREPS.A stenosperma and A. duranensis primer pairs identified and designed using MREPS and other information (sequence information, orientation, sequence length, expected product length, Tm and SSR motif length).

Format: XLSX Size: 394KB Download file

Open Data