Table 3

Expression and secretome data of predicted protein hydrolases
Transcriptomic data
Expressiona Fold changesb FDR q-valuesb Secretome datac
Identifier Gene (Predicted) function Expd Day 1 Day 3 Day 6 Day 1 Day 3 Day 6 Day 1 Day 3 Day 6 Expd Day 1 Day 3 Day 6
SPepresent
An01g00530 pepB A4 family peptidase 0.6 84.9 32.5 113.9 148.1 56.7 198.8 1.4E-16 9.1E-16 5.9E-17 - - - -
An14g04710 pepA Aspartyl protease 1.4 180.1 34.7 70.5 130.2 25.1 51.0 1.9E-13 2.2E-11 2.2E-12 +++ ++++++ ++++++ ++++++
An01g01750 Subtilisin-like serine protease 1.1 45.8 9.8 8.9 40.0 8.6 7.7 2.3E-14 9.5E-12 1.5E-11 - +++ ++++ +++
An02g01550 Secreted serine protease 2.4 63.2 25.3 6.0 26.0 10.4 2.5 8.6E-10 4.8E-08 9.8E-04 ++ ++++ ++++ -
An08g04640 Lysosomal pepstatininsensitive protease 1.1 16.2 8.0 10.6 14.3 7.1 9.3 4.0E-12 1.5E-10 3.2E-11 + ++++ +++++ ++++
An06g00190 Lysosomal pepstatininsensitive protease 2.3 31.5 27.2 25.9 13.4 11.6 11.0 1.1E-10 2.3E-10 2.8E-10 +++ ++++ +++++ ++++
An03g01010 Lysosomal pepstatininsensitive protease 1.2 14.9 3.2 4.2 12.7 2.7 3.6 1.2E-09 4.8E-05 3.6E-06 + +++ +++ +++
An02g04690 Serine-typecarboxypeptidase I 6.4 64.7 31.7 34.9 10.1 4.9 5.4 9.7E-10 8.4E-08 4.2E-08 ++ ++++ +++++ +++++
An12g05960 Dipeptidyl peptidase II 1.0 9.2 4.1 2.7 9.0 4.0 2.6 2.8E-11 7.3E-09 4.78-07 - +++ ++++ ++++
An07g08030 pepF Serine carboxypeptidase 0.8 7.0 4.2 6.3 8.6 5.2 7.7 1.2E-11 2.7E-10 2.2E-11 - ++ +++ +++
An11g06350 Carboxypeptidase 1.1 8.3 3.6 1.7 7.9 3.4 1.6 5.0E-11 2.1E-08 5.0E-04 - - - -
An09g03780 pepD Subtilisin-like serineprotease 0.5 3.0 0.6 0.7 5.8 1.1 1.4 2.2E-11 1.6E-01 2.4E-03 - - - -
An12g03300 Aspartic protease 0.7 3.4 0.5 0.4 5.0 0.7 0.7 1.1E-08 1.2E-02 1.0E-02 ++ +++
An15g06280 Aspartic proteinase[truncated ORF] 5.8 25.2 33.2 22.4 4.3 5.7 3.8 4.1E-09 6.1E-10 1.2E-08 ++ +++ ++++ ++++
An16g09010 Carboxypeptidase I[putative frameshift] 0.6 2.2 3.6 4.7 4.0 6.4 8.4 2.5E-09 8.8E-11 1.8E-11 - - +++ +++
An14g00620 Aminopeptidase 5.3 20.4 14.7 14.3 3.8 2.8 2.7 4.6E-09 1.3E-07 1.8E-07 - - - -
An07g03880 pepC Serine proteinase 31.1 111.2 101.5 91.5 3.6 3.3 2.9 8.5E-12 2.2E-11 6.3E-11 ++ - - -
An07g10060 Proteinase B inhibitor 4.2 13.1 17.0 19.5 3.1 4.1 4.7 1.1E-08 1.1E-09 3.5E-10 +++ - - -
An02g07210 pepE Aspartic protease 30.4 83.9 57.8 57.2 2.8 1.9 1.9 1.4E-10 3.3E-08 3.9E-08 - ++++ +++ ++
An15g07700 Aspergillopepsin IIprecursor 1.3 3.5 3.3 4.4 2.7 2.6 3.4 3.5E-07 5.2E-07 3.1E-08 - - - -
An18g01320 Extracellular proteaseprecursor 21.9 54.8 14.7 4.9 2.5 0.7 0.2 1.8E-05 1.5E-02 6.8E-08 +++ ++++ +++++ ++++
An02g13740 Gly-X carboxypeptidaseprecursor 1.9 4.4 4.2 4.4 2.3 2.2 2.4 9.5E-09 2.1E-08 8.6E-09 - - - -
An03g01660 Vacuolar aminopeptidase Y 9.1 19.2 17.4 17.5 2.1 1.9 1.9 3.1E-09 1.9E-08 1.5E-08 ++ - - -
An08g08750 cpY Carboxypeptidase 33.8 67.9 53.8 51.3 2.0 1.6 1.5 1.0E-08 1.3E-06 4.2E-06 ++ - - -
An14g03250 Aspergillopepsin II 0.7 1.2 0.9 1.6 1.7 1.3 2.2 2.5E-04 3.0E-02 3.1E-06 - +++ - -
An07g10410 Metalloprotease 1.2 1.3 7.5 16.1 1.1 6.5 13.9 2.8E-01 8.3E-11 1.6E-12 - - - -
SPeabsent
An01g00370 Aspergillopepsin 0.8 89.0 16.8 10.0 110.2 20.8 12.3 3.6E-14 4.9E-12 3.9E-11 ++ +++++ +++++ +++++
An02g00090 Prolidase 0.4 20.4 22.7 7.6 53.2 59.4 19.8 1.2E-14 1.0E-14 1.9E-13 - - - -
An14g02080 Prolidase 1.8 18.0 6.8 4.1 9.7 3.7 2.2 4.4E-09 2.8E-06 3.8E-04 - - - -
An09g02830 Acylaminoacyl-peptidase 4.3 39.7 18.0 9.9 9.2 4.2 2.3 1.8E-12 3.0E-10 1.6E-07 - - - -
An17g00390 Aminopeptidase 4.6 27.7 10.2 7.4 6.0 2.2 1.6 3.2E-11 5.1E-07 1.2E-04 - - - -
An18g03980 Glutamatecarboxypeptidase II 3.2 19.0 13.8 13.7 5.9 4.3 4.3 3.3E-12 3.3E-11 3.4E-11 - - - -
An01g01720 Bleomycin hydrolase 0.6 3.3 1.4 1.0 5.4 2.3 1.7 1.6E-10 8.4E-07 1.0E-04 - - - -
An07g06490 Insulin-degrading enzyme 0.4 2.1 1.1 1.1 5.2 2.7 2.7 8.5E-11 2.9E-08 3.7E-08 - - - -
An11g05920 Prolidase 0.9 4.6 1.5 1.3 5.0 1.6 1.4 5.2E-08 9.1E-03 5.3E-02 - - - -
An11g02950 Calpain family cysteine protease 0.9 3.6 3.2 1.7 4.3 3.7 2.0 9.8E-10 3.4E-09 6.0E-06 - - - -
An01g14920 Metallopeptidase 0.5 1.8 1.3 1.1 3.9 2.8 2.3 1.1E-09 4.0E-08 4.1E-07 - - - -
An11g01970 Pyroglutamyl peptidase 2.1 8.2 6.0 6.8 3.9 2.8 3.2 1.0E-11 2.4E-10 6.2E-11 - - - -
An14g01530 Subtilisin-like serine proteases 0.5 2.0 1.1 0.7 3.7 2.1 1.3 9.9E-09 7.0E-06 2.6E-02 - - - -
An09g06800 Leucyl aminopeptidase 10.9 40.3 37.7 33.4 3.7 3.5 3.1 1.3E-11 2.5E-11 8.2E-11 - - - -
An12g01820 Ubiquitin carboxyl-terminal hydrolase 0.8 2.6 1.7 1.1 3.4 2.2 1.5 8.1E-10 2.0E-07 4.4E-04 - - - -
An01g08470 Ubiquitin carboxyl-terminal hydrolase 1.8 5.9 7.5 7.4 3.3 4.2 4.1 6.1E-10 8.3E-11 9.6E-11 - - - -
An04g00410 Dipeptidyl peptidase III 17.0 51.9 37.8 29.6 3.1 2.2 1.7 9.6E-10 5.6E-08 3.4E-06 - - - -
An16g08150 Dipeptidyl-peptidase V 10.5 26.0 17.4 17.2 2.5 1.7 1.6 4.3E-09 4.1E-06 4.9E-06 - - - -
An18g02980 Endopeptidase 4.6 10.4 8.3 8.2 2.3 1.8 1.8 4.0E-09 2.0E-07 2.6E-07 - - - -
An04g06940 prtT Transcriptional activator of proteases 5.4 58.4 35.2 24.9 10.8 6.5 4.6 5.7E-12 9.8E-11 1.0E-09 - - - -

amRNA abundance relative (%) to the gamma-actin (An15g00560) encoding transcript during exponential growth.

bFold changes and FDR q-values for comparisons with transcriptome data from the exponential growth phase.

cProtein abundance in filtrates: (-) not detected; (+) < 5 ng ml−1; (++) < 50 ng ml−1; (+++) < 250 ng ml−1; (++++) < 1 μg ml−1; (+++++) < 4 μg ml−1; (++++++) > 4 μg ml−1; () biological and/or technical relative standard deviation above 100 and 50, respectively.

dExponential growth phase.

eSignal peptide sequence prediction [43].

Nitsche et al.

Nitsche et al. BMC Genomics 2012 13:380   doi:10.1186/1471-2164-13-380

Open Data