Table 2 |
|||||
| Expression values of A. niger ERAD genes | |||||
| Gene ID | Gene name | Description | Fold change | ||
| HacACA-1/HacAWT | HacACA-2/HacAWT | HacACA-3/HacAWT | |||
| An15g00640 | derA | strong similarity to hypothetical protein GABA-A receptor epsilon subunit – C. elegans | 4.0 | 6.0 | 6.4 |
| An01g12720 | hrdC | similarity to tumour suppressor TSA305 protein of patent WO9928457-A1 – H. sapiens | 3.3 | 3.9 | 4.0 |
| An01g14100 | mifA | weak similarity to stress protein Herp – M. musculus | 3.1 | 4.3 | 4.6 |
| An18g06220 | mnsA | strong similarity to alpha-mannosidase MNS1 – S. cerevisiae | 4.2 | 4.7 | 5.0 |
| An08g09000 | strong similarity to ubiquitin-like protein DSK2 – S. cerevisiae | 1.8 | 1.7 | 1.9 | |
| An16g07970 | similarity to autocrine motility factor receptor Amfr – M. musculus | 2.9 | 2.9 | 3.1 | |
| An03g04340 | strong similarity to ER membrane translocation facilitator Sec61 – Y. lipolytica | 2.6 | 2.6 | 2.6 | |
| An04g01720 | similarity to DnaJ protein SIS1 – C. curvatus | 1.8 | 2.3 | 2.2 | |
| An12g00340 | similarity to alpha 1,2-mannosidase IB – H. sapiens | 3.2 | 2.9 | 3.1 | |
| An04g00360 | strong similarity to transport vesicle formation protein Sec13p – S. cerevisiae | 2.1 | 2.1 | 2.1 | |
| An09g06110 | strong similarity to ubiquitin conjugating enzyme ubcp3p – S. pombe | 1.4* | 1.6 | 1.7 | |
* Not significantly differentially expressed.
Carvalho et al. BMC Genomics 2012 13:350 doi:10.1186/1471-2164-13-350
