Table 2

Expression values of A. niger ERAD genes
Gene ID Gene name Description Fold change
HacACA-1/HacAWT HacACA-2/HacAWT HacACA-3/HacAWT
An15g00640 derA strong similarity to hypothetical protein GABA-A receptor epsilon subunit – C. elegans 4.0 6.0 6.4
An01g12720 hrdC similarity to tumour suppressor TSA305 protein of patent WO9928457-A1 – H. sapiens 3.3 3.9 4.0
An01g14100 mifA weak similarity to stress protein Herp – M. musculus 3.1 4.3 4.6
An18g06220 mnsA strong similarity to alpha-mannosidase MNS1 – S. cerevisiae 4.2 4.7 5.0
An08g09000 strong similarity to ubiquitin-like protein DSK2 – S. cerevisiae 1.8 1.7 1.9
An16g07970 similarity to autocrine motility factor receptor Amfr – M. musculus 2.9 2.9 3.1
An03g04340 strong similarity to ER membrane translocation facilitator Sec61 – Y. lipolytica 2.6 2.6 2.6
An04g01720 similarity to DnaJ protein SIS1 – C. curvatus 1.8 2.3 2.2
An12g00340 similarity to alpha 1,2-mannosidase IB – H. sapiens 3.2 2.9 3.1
An04g00360 strong similarity to transport vesicle formation protein Sec13p – S. cerevisiae 2.1 2.1 2.1
An09g06110 strong similarity to ubiquitin conjugating enzyme ubcp3p – S. pombe 1.4* 1.6 1.7

* Not significantly differentially expressed.

Carvalho et al.

Carvalho et al. BMC Genomics 2012 13:350   doi:10.1186/1471-2164-13-350

Open Data